Gene : Bostr.22252s0351 B. stricta v1.2

Defline:  (1 of 1) 4.2.1.55 - 3-hydroxybutyryl-CoA dehydratase / Crotonase Genomic Order:  351
Name:  ? Bostr.22252s0351 Secondary Identifier:  ? PAC:30659966

Sequence Feature Displayer

Ontology Annotation Displayer

11 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta ILEUDEG-PWY Boechera stricta pathologic  
Bstricta PWY-5136 Boechera stricta pathologic  
Bstricta PWY-5137 Boechera stricta pathologic  
Bstricta PWY-5138 Boechera stricta pathologic  
Bstricta PWY-561 Boechera stricta pathologic  
Bstricta PWY-6435 Boechera stricta pathologic  
Bstricta PWY-6837 Boechera stricta pathologic  
Bstricta PWY-7036 Boechera stricta pathologic  
Bstricta PWY-735 Boechera stricta pathologic  
Bstricta PWY-7606 Boechera stricta pathologic  
Bstricta VALDEG-PWY Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.22252s0351 0.5kb upstream 0.5kb upstream 5124 true Scaffold22252: 1504196-1509319 Boechera stricta
Bostr.22252s0351 0.5kb upstream 0.5kb upstream 500 false Scaffold22252: 1508820-1509319 Boechera stricta
Bostr.22252s0351 0.5kb downstream 0.5kb downstream 5124 true Scaffold22252: 1503696-1508819 Boechera stricta
Bostr.22252s0351 0.5kb downstream 0.5kb downstream 500 false Scaffold22252: 1503696-1504195 Boechera stricta
Bostr.22252s0351 1.0kb upstream 1.0kb upstream 5624 true Scaffold22252: 1504196-1509819 Boechera stricta
Bostr.22252s0351 1.0kb upstream 1.0kb upstream 1000 false Scaffold22252: 1508820-1509819 Boechera stricta
Bostr.22252s0351 1.0kb downstream 1.0kb downstream 5624 true Scaffold22252: 1503196-1508819 Boechera stricta
Bostr.22252s0351 1.0kb downstream 1.0kb downstream 1000 false Scaffold22252: 1503196-1504195 Boechera stricta
Bostr.22252s0351 2.0kb upstream 2.0kb upstream 6624 true Scaffold22252: 1504196-1510819 Boechera stricta
Bostr.22252s0351 2.0kb upstream 2.0kb upstream 2000 false Scaffold22252: 1508820-1510819 Boechera stricta
Bostr.22252s0351 2.0kb downstream 2.0kb downstream 6624 true Scaffold22252: 1502196-1508819 Boechera stricta
Bostr.22252s0351 2.0kb downstream 2.0kb downstream 2000 false Scaffold22252: 1502196-1504195 Boechera stricta
Bostr.22252s0351 5.0kb upstream 5.0kb upstream 9624 true Scaffold22252: 1504196-1513819 Boechera stricta
Bostr.22252s0351 5.0kb upstream 5.0kb upstream 5000 false Scaffold22252: 1508820-1513819 Boechera stricta
Bostr.22252s0351 5.0kb downstream 5.0kb downstream 9624 true Scaffold22252: 1499196-1508819 Boechera stricta
Bostr.22252s0351 5.0kb downstream 5.0kb downstream 5000 false Scaffold22252: 1499196-1504195 Boechera stricta
Bostr.22252s0351 10.0kb upstream 10.0kb upstream 14624 true Scaffold22252: 1504196-1518819 Boechera stricta
Bostr.22252s0351 10.0kb upstream 10.0kb upstream 10000 false Scaffold22252: 1508820-1518819 Boechera stricta
Bostr.22252s0351 10.0kb downstream 10.0kb downstream 14624 true Scaffold22252: 1494196-1508819 Boechera stricta
Bostr.22252s0351 10.0kb downstream 10.0kb downstream 10000 false Scaffold22252: 1494196-1504195 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378550 5261 Brassicaceae View MSA
123830316 5264 Brassicales-Malvales View MSA
124341284 5266 SBM View MSA
124238455 5268 Malvidae View MSA
124061936 5270 Rosid View MSA
123740661 5271 Pentapetalae View MSA
122785876 5272 Eudicot View MSA
122047259 5273 Angiosperm View MSA
121345387 5274 Embryophyte View MSA
123424743 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain