Gene : Bostr.22252s0370 B. stricta v1.2
Defline:  (1 of 1) PTHR11699:SF25 - ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED Genomic Order:  370
Name:  ? Bostr.22252s0370 Secondary Identifier:  ? PAC:30659819
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-2724 Boechera stricta pathologic  
Bstricta PWY-6054 Boechera stricta pathologic  
Bstricta PWY66-21 Boechera stricta pathologic  
Bstricta PWY66-389 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.22252s0370 0.5kb upstream 0.5kb upstream 4661 true Scaffold22252: 1582987-1587647 Boechera stricta
Bostr.22252s0370 0.5kb upstream 0.5kb upstream 500 false Scaffold22252: 1582987-1583486 Boechera stricta
Bostr.22252s0370 0.5kb downstream 0.5kb downstream 4661 true Scaffold22252: 1583487-1588147 Boechera stricta
Bostr.22252s0370 0.5kb downstream 0.5kb downstream 500 false Scaffold22252: 1587648-1588147 Boechera stricta
Bostr.22252s0370 1.0kb upstream 1.0kb upstream 5161 true Scaffold22252: 1582487-1587647 Boechera stricta
Bostr.22252s0370 1.0kb upstream 1.0kb upstream 1000 false Scaffold22252: 1582487-1583486 Boechera stricta
Bostr.22252s0370 1.0kb downstream 1.0kb downstream 5161 true Scaffold22252: 1583487-1588647 Boechera stricta
Bostr.22252s0370 1.0kb downstream 1.0kb downstream 1000 false Scaffold22252: 1587648-1588647 Boechera stricta
Bostr.22252s0370 2.0kb upstream 2.0kb upstream 6161 true Scaffold22252: 1581487-1587647 Boechera stricta
Bostr.22252s0370 2.0kb upstream 2.0kb upstream 2000 false Scaffold22252: 1581487-1583486 Boechera stricta
Bostr.22252s0370 2.0kb downstream 2.0kb downstream 6161 true Scaffold22252: 1583487-1589647 Boechera stricta
Bostr.22252s0370 2.0kb downstream 2.0kb downstream 2000 false Scaffold22252: 1587648-1589647 Boechera stricta
Bostr.22252s0370 5.0kb upstream 5.0kb upstream 9161 true Scaffold22252: 1578487-1587647 Boechera stricta
Bostr.22252s0370 5.0kb upstream 5.0kb upstream 5000 false Scaffold22252: 1578487-1583486 Boechera stricta
Bostr.22252s0370 5.0kb downstream 5.0kb downstream 9161 true Scaffold22252: 1583487-1592647 Boechera stricta
Bostr.22252s0370 5.0kb downstream 5.0kb downstream 5000 false Scaffold22252: 1587648-1592647 Boechera stricta
Bostr.22252s0370 10.0kb upstream 10.0kb upstream 14161 true Scaffold22252: 1573487-1587647 Boechera stricta
Bostr.22252s0370 10.0kb upstream 10.0kb upstream 10000 false Scaffold22252: 1573487-1583486 Boechera stricta
Bostr.22252s0370 10.0kb downstream 10.0kb downstream 14161 true Scaffold22252: 1583487-1597647 Boechera stricta
Bostr.22252s0370 10.0kb downstream 10.0kb downstream 10000 false Scaffold22252: 1587648-1597647 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365590 5261 Brassicaceae View MSA
123833442 5264 Brassicales-Malvales View MSA
124345840 5266 SBM View MSA
124239129 5268 Malvidae View MSA
124060659 5270 Rosid View MSA
123739453 5271 Pentapetalae View MSA
122786006 5272 Eudicot View MSA
122043329 5273 Angiosperm View MSA
121348017 5274 Embryophyte View MSA
123427690 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain