Gene : Bostr.22252s0372 B. stricta v1.2

Defline:  (1 of 2) PTHR11071:SF200 - CYCLOPHILIN-LIKE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FAMILY PROTEIN-RELATED Genomic Order:  372
Name:  ? Bostr.22252s0372 Secondary Identifier:  ? PAC:30659829

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.22252s0372 0.5kb upstream 0.5kb upstream 2851 true Scaffold22252: 1589910-1592760 Boechera stricta
Bostr.22252s0372 0.5kb upstream 0.5kb upstream 500 false Scaffold22252: 1592261-1592760 Boechera stricta
Bostr.22252s0372 0.5kb downstream 0.5kb downstream 2851 true Scaffold22252: 1589410-1592260 Boechera stricta
Bostr.22252s0372 0.5kb downstream 0.5kb downstream 500 false Scaffold22252: 1589410-1589909 Boechera stricta
Bostr.22252s0372 1.0kb upstream 1.0kb upstream 3351 true Scaffold22252: 1589910-1593260 Boechera stricta
Bostr.22252s0372 1.0kb upstream 1.0kb upstream 1000 false Scaffold22252: 1592261-1593260 Boechera stricta
Bostr.22252s0372 1.0kb downstream 1.0kb downstream 3351 true Scaffold22252: 1588910-1592260 Boechera stricta
Bostr.22252s0372 1.0kb downstream 1.0kb downstream 1000 false Scaffold22252: 1588910-1589909 Boechera stricta
Bostr.22252s0372 2.0kb upstream 2.0kb upstream 4351 true Scaffold22252: 1589910-1594260 Boechera stricta
Bostr.22252s0372 2.0kb upstream 2.0kb upstream 2000 false Scaffold22252: 1592261-1594260 Boechera stricta
Bostr.22252s0372 2.0kb downstream 2.0kb downstream 4351 true Scaffold22252: 1587910-1592260 Boechera stricta
Bostr.22252s0372 2.0kb downstream 2.0kb downstream 2000 false Scaffold22252: 1587910-1589909 Boechera stricta
Bostr.22252s0372 5.0kb upstream 5.0kb upstream 7351 true Scaffold22252: 1589910-1597260 Boechera stricta
Bostr.22252s0372 5.0kb upstream 5.0kb upstream 5000 false Scaffold22252: 1592261-1597260 Boechera stricta
Bostr.22252s0372 5.0kb downstream 5.0kb downstream 7351 true Scaffold22252: 1584910-1592260 Boechera stricta
Bostr.22252s0372 5.0kb downstream 5.0kb downstream 5000 false Scaffold22252: 1584910-1589909 Boechera stricta
Bostr.22252s0372 10.0kb upstream 10.0kb upstream 12351 true Scaffold22252: 1589910-1602260 Boechera stricta
Bostr.22252s0372 10.0kb upstream 10.0kb upstream 10000 false Scaffold22252: 1592261-1602260 Boechera stricta
Bostr.22252s0372 10.0kb downstream 10.0kb downstream 12351 true Scaffold22252: 1579910-1592260 Boechera stricta
Bostr.22252s0372 10.0kb downstream 10.0kb downstream 10000 false Scaffold22252: 1579910-1589909 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363799 5261 Brassicaceae View MSA
123841585 5264 Brassicales-Malvales View MSA
124345104 5266 SBM View MSA
124253889 5268 Malvidae View MSA
124066155 5270 Rosid View MSA
123744610 5271 Pentapetalae View MSA
122791251 5272 Eudicot View MSA
122046189 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121350485 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain