Gene : Bostr.22252s0307 B. stricta v1.2

Defline:  (1 of 4) PTHR31413:SF4 - NINJA-FAMILY PROTEIN AFP1-RELATED Genomic Order:  307
Name:  ? Bostr.22252s0307 Secondary Identifier:  ? PAC:30659827

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.22252s0307 0.5kb upstream 0.5kb upstream 1991 true Scaffold22252: 1326912-1328902 Boechera stricta
Bostr.22252s0307 0.5kb upstream 0.5kb upstream 500 false Scaffold22252: 1326912-1327411 Boechera stricta
Bostr.22252s0307 0.5kb downstream 0.5kb downstream 1991 true Scaffold22252: 1327412-1329402 Boechera stricta
Bostr.22252s0307 0.5kb downstream 0.5kb downstream 500 false Scaffold22252: 1328903-1329402 Boechera stricta
Bostr.22252s0307 1.0kb upstream 1.0kb upstream 2491 true Scaffold22252: 1326412-1328902 Boechera stricta
Bostr.22252s0307 1.0kb upstream 1.0kb upstream 1000 false Scaffold22252: 1326412-1327411 Boechera stricta
Bostr.22252s0307 1.0kb downstream 1.0kb downstream 2491 true Scaffold22252: 1327412-1329902 Boechera stricta
Bostr.22252s0307 1.0kb downstream 1.0kb downstream 1000 false Scaffold22252: 1328903-1329902 Boechera stricta
Bostr.22252s0307 2.0kb upstream 2.0kb upstream 3491 true Scaffold22252: 1325412-1328902 Boechera stricta
Bostr.22252s0307 2.0kb upstream 2.0kb upstream 2000 false Scaffold22252: 1325412-1327411 Boechera stricta
Bostr.22252s0307 2.0kb downstream 2.0kb downstream 3491 true Scaffold22252: 1327412-1330902 Boechera stricta
Bostr.22252s0307 2.0kb downstream 2.0kb downstream 2000 false Scaffold22252: 1328903-1330902 Boechera stricta
Bostr.22252s0307 5.0kb upstream 5.0kb upstream 6491 true Scaffold22252: 1322412-1328902 Boechera stricta
Bostr.22252s0307 5.0kb upstream 5.0kb upstream 5000 false Scaffold22252: 1322412-1327411 Boechera stricta
Bostr.22252s0307 5.0kb downstream 5.0kb downstream 6491 true Scaffold22252: 1327412-1333902 Boechera stricta
Bostr.22252s0307 5.0kb downstream 5.0kb downstream 5000 false Scaffold22252: 1328903-1333902 Boechera stricta
Bostr.22252s0307 10.0kb upstream 10.0kb upstream 11491 true Scaffold22252: 1317412-1328902 Boechera stricta
Bostr.22252s0307 10.0kb upstream 10.0kb upstream 10000 false Scaffold22252: 1317412-1327411 Boechera stricta
Bostr.22252s0307 10.0kb downstream 10.0kb downstream 11491 true Scaffold22252: 1327412-1338902 Boechera stricta
Bostr.22252s0307 10.0kb downstream 10.0kb downstream 10000 false Scaffold22252: 1328903-1338902 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366621 5261 Brassicaceae View MSA
123799214 5264 Brassicales-Malvales View MSA
124296760 5266 SBM View MSA
124251961 5268 Malvidae View MSA
124071046 5270 Rosid View MSA
123753389 5271 Pentapetalae View MSA
122792096 5272 Eudicot View MSA
122050177 5273 Angiosperm View MSA
121311781 5274 Embryophyte View MSA
123349031 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain