Gene : Bostr.24513s0133 B. stricta v1.2
Defline:  (1 of 2) PTHR11879//PTHR11879:SF18 - ASPARTATE AMINOTRANSFERASE Genomic Order:  133
Name:  ? Bostr.24513s0133 Secondary Identifier:  ? PAC:30677282
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta ASPARTATE-DEG1-PWY Boechera stricta pathologic  
Bstricta ASPARTATESYN-PWY Boechera stricta pathologic  
Bstricta PWY-3001 Boechera stricta pathologic  
Bstricta PWY-7115 Boechera stricta pathologic  
Bstricta PWY-7117 Boechera stricta pathologic  
Bstricta THRESYN-PWY Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.24513s0133 0.5kb upstream 0.5kb upstream 4128 true Scaffold24513: 769357-773484 Boechera stricta
Bostr.24513s0133 0.5kb upstream 0.5kb upstream 500 false Scaffold24513: 772985-773484 Boechera stricta
Bostr.24513s0133 0.5kb downstream 0.5kb downstream 4128 true Scaffold24513: 768857-772984 Boechera stricta
Bostr.24513s0133 0.5kb downstream 0.5kb downstream 500 false Scaffold24513: 768857-769356 Boechera stricta
Bostr.24513s0133 1.0kb upstream 1.0kb upstream 4628 true Scaffold24513: 769357-773984 Boechera stricta
Bostr.24513s0133 1.0kb upstream 1.0kb upstream 1000 false Scaffold24513: 772985-773984 Boechera stricta
Bostr.24513s0133 1.0kb downstream 1.0kb downstream 4628 true Scaffold24513: 768357-772984 Boechera stricta
Bostr.24513s0133 1.0kb downstream 1.0kb downstream 1000 false Scaffold24513: 768357-769356 Boechera stricta
Bostr.24513s0133 2.0kb upstream 2.0kb upstream 5628 true Scaffold24513: 769357-774984 Boechera stricta
Bostr.24513s0133 2.0kb upstream 2.0kb upstream 2000 false Scaffold24513: 772985-774984 Boechera stricta
Bostr.24513s0133 2.0kb downstream 2.0kb downstream 5628 true Scaffold24513: 767357-772984 Boechera stricta
Bostr.24513s0133 2.0kb downstream 2.0kb downstream 2000 false Scaffold24513: 767357-769356 Boechera stricta
Bostr.24513s0133 5.0kb upstream 5.0kb upstream 8628 true Scaffold24513: 769357-777984 Boechera stricta
Bostr.24513s0133 5.0kb upstream 5.0kb upstream 5000 false Scaffold24513: 772985-777984 Boechera stricta
Bostr.24513s0133 5.0kb downstream 5.0kb downstream 8628 true Scaffold24513: 764357-772984 Boechera stricta
Bostr.24513s0133 5.0kb downstream 5.0kb downstream 5000 false Scaffold24513: 764357-769356 Boechera stricta
Bostr.24513s0133 10.0kb upstream 10.0kb upstream 13628 true Scaffold24513: 769357-782984 Boechera stricta
Bostr.24513s0133 10.0kb upstream 10.0kb upstream 10000 false Scaffold24513: 772985-782984 Boechera stricta
Bostr.24513s0133 10.0kb downstream 10.0kb downstream 13628 true Scaffold24513: 759357-772984 Boechera stricta
Bostr.24513s0133 10.0kb downstream 10.0kb downstream 10000 false Scaffold24513: 759357-769356 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368520 5261 Brassicaceae View MSA
123839385 5264 Brassicales-Malvales View MSA
124344803 5266 SBM View MSA
124241659 5268 Malvidae View MSA
124063482 5270 Rosid View MSA
123737145 5271 Pentapetalae View MSA
122793092 5272 Eudicot View MSA
122046072 5273 Angiosperm View MSA
121344214 5274 Embryophyte View MSA
123424622 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain