Gene : Bostr.24513s0193 B. stricta v1.2

Defline:  (1 of 2) PTHR12383:SF15 - THYLAKOIDAL PROCESSING PEPTIDASE 1, CHLOROPLASTIC-RELATED Genomic Order:  193
Name:  ? Bostr.24513s0193 Secondary Identifier:  ? PAC:30677129

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.24513s0193 0.5kb upstream 0.5kb upstream 3054 true Scaffold24513: 1204655-1207708 Boechera stricta
Bostr.24513s0193 0.5kb upstream 0.5kb upstream 500 false Scaffold24513: 1207209-1207708 Boechera stricta
Bostr.24513s0193 0.5kb downstream 0.5kb downstream 3054 true Scaffold24513: 1204155-1207208 Boechera stricta
Bostr.24513s0193 0.5kb downstream 0.5kb downstream 500 false Scaffold24513: 1204155-1204654 Boechera stricta
Bostr.24513s0193 1.0kb upstream 1.0kb upstream 3554 true Scaffold24513: 1204655-1208208 Boechera stricta
Bostr.24513s0193 1.0kb upstream 1.0kb upstream 1000 false Scaffold24513: 1207209-1208208 Boechera stricta
Bostr.24513s0193 1.0kb downstream 1.0kb downstream 3554 true Scaffold24513: 1203655-1207208 Boechera stricta
Bostr.24513s0193 1.0kb downstream 1.0kb downstream 1000 false Scaffold24513: 1203655-1204654 Boechera stricta
Bostr.24513s0193 2.0kb upstream 2.0kb upstream 4554 true Scaffold24513: 1204655-1209208 Boechera stricta
Bostr.24513s0193 2.0kb upstream 2.0kb upstream 2000 false Scaffold24513: 1207209-1209208 Boechera stricta
Bostr.24513s0193 2.0kb downstream 2.0kb downstream 4554 true Scaffold24513: 1202655-1207208 Boechera stricta
Bostr.24513s0193 2.0kb downstream 2.0kb downstream 2000 false Scaffold24513: 1202655-1204654 Boechera stricta
Bostr.24513s0193 5.0kb upstream 5.0kb upstream 7554 true Scaffold24513: 1204655-1212208 Boechera stricta
Bostr.24513s0193 5.0kb upstream 5.0kb upstream 5000 false Scaffold24513: 1207209-1212208 Boechera stricta
Bostr.24513s0193 5.0kb downstream 5.0kb downstream 7554 true Scaffold24513: 1199655-1207208 Boechera stricta
Bostr.24513s0193 5.0kb downstream 5.0kb downstream 5000 false Scaffold24513: 1199655-1204654 Boechera stricta
Bostr.24513s0193 10.0kb upstream 10.0kb upstream 12554 true Scaffold24513: 1204655-1217208 Boechera stricta
Bostr.24513s0193 10.0kb upstream 10.0kb upstream 10000 false Scaffold24513: 1207209-1217208 Boechera stricta
Bostr.24513s0193 10.0kb downstream 10.0kb downstream 12554 true Scaffold24513: 1194655-1207208 Boechera stricta
Bostr.24513s0193 10.0kb downstream 10.0kb downstream 10000 false Scaffold24513: 1194655-1204654 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377072 5261 Brassicaceae View MSA
123801433 5264 Brassicales-Malvales View MSA
124346815 5266 SBM View MSA
124237216 5268 Malvidae View MSA
124066317 5270 Rosid View MSA
123747244 5271 Pentapetalae View MSA
122789106 5272 Eudicot View MSA
122046589 5273 Angiosperm View MSA
123428894 5275 Viridiplantae View MSA
121348818 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain