Gene : Bostr.24513s0066 B. stricta v1.2
Defline:  (1 of 4) 1.11.1.12 - Phospholipid-hydroperoxide glutathione peroxidase / Peroxidation-inhibiting protein Genomic Order:  66
Name:  ? Bostr.24513s0066 Secondary Identifier:  ? PAC:30677319
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-4081 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.24513s0066 0.5kb upstream 0.5kb upstream 3814 true Scaffold24513: 400369-404182 Boechera stricta
Bostr.24513s0066 0.5kb upstream 0.5kb upstream 500 false Scaffold24513: 400369-400868 Boechera stricta
Bostr.24513s0066 0.5kb downstream 0.5kb downstream 3814 true Scaffold24513: 400869-404682 Boechera stricta
Bostr.24513s0066 0.5kb downstream 0.5kb downstream 500 false Scaffold24513: 404183-404682 Boechera stricta
Bostr.24513s0066 1.0kb upstream 1.0kb upstream 4314 true Scaffold24513: 399869-404182 Boechera stricta
Bostr.24513s0066 1.0kb upstream 1.0kb upstream 1000 false Scaffold24513: 399869-400868 Boechera stricta
Bostr.24513s0066 1.0kb downstream 1.0kb downstream 4314 true Scaffold24513: 400869-405182 Boechera stricta
Bostr.24513s0066 1.0kb downstream 1.0kb downstream 1000 false Scaffold24513: 404183-405182 Boechera stricta
Bostr.24513s0066 2.0kb upstream 2.0kb upstream 5314 true Scaffold24513: 398869-404182 Boechera stricta
Bostr.24513s0066 2.0kb upstream 2.0kb upstream 2000 false Scaffold24513: 398869-400868 Boechera stricta
Bostr.24513s0066 2.0kb downstream 2.0kb downstream 5314 true Scaffold24513: 400869-406182 Boechera stricta
Bostr.24513s0066 2.0kb downstream 2.0kb downstream 2000 false Scaffold24513: 404183-406182 Boechera stricta
Bostr.24513s0066 5.0kb upstream 5.0kb upstream 8314 true Scaffold24513: 395869-404182 Boechera stricta
Bostr.24513s0066 5.0kb upstream 5.0kb upstream 5000 false Scaffold24513: 395869-400868 Boechera stricta
Bostr.24513s0066 5.0kb downstream 5.0kb downstream 8314 true Scaffold24513: 400869-409182 Boechera stricta
Bostr.24513s0066 5.0kb downstream 5.0kb downstream 5000 false Scaffold24513: 404183-409182 Boechera stricta
Bostr.24513s0066 10.0kb upstream 10.0kb upstream 13314 true Scaffold24513: 390869-404182 Boechera stricta
Bostr.24513s0066 10.0kb upstream 10.0kb upstream 10000 false Scaffold24513: 390869-400868 Boechera stricta
Bostr.24513s0066 10.0kb downstream 10.0kb downstream 13314 true Scaffold24513: 400869-414182 Boechera stricta
Bostr.24513s0066 10.0kb downstream 10.0kb downstream 10000 false Scaffold24513: 404183-414182 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377470 5261 Brassicaceae View MSA
123839339 5264 Brassicales-Malvales View MSA
124341945 5266 SBM View MSA
124254095 5268 Malvidae View MSA
124060403 5270 Rosid View MSA
123752336 5271 Pentapetalae View MSA
122792727 5272 Eudicot View MSA
122049273 5273 Angiosperm View MSA
121349724 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain