Gene : Bostr.24513s0070 B. stricta v1.2
Defline:  (1 of 2) PTHR11685:SF154 - E3 UBIQUITIN-PROTEIN LIGASE ARI5-RELATED Genomic Order:  70
Name:  ? Bostr.24513s0070 Secondary Identifier:  ? PAC:30677266
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7511 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.24513s0070 0.5kb upstream 0.5kb upstream 5740 true Scaffold24513: 418555-424294 Boechera stricta
Bostr.24513s0070 0.5kb upstream 0.5kb upstream 500 false Scaffold24513: 418555-419054 Boechera stricta
Bostr.24513s0070 0.5kb downstream 0.5kb downstream 5740 true Scaffold24513: 419055-424794 Boechera stricta
Bostr.24513s0070 0.5kb downstream 0.5kb downstream 500 false Scaffold24513: 424295-424794 Boechera stricta
Bostr.24513s0070 1.0kb upstream 1.0kb upstream 6240 true Scaffold24513: 418055-424294 Boechera stricta
Bostr.24513s0070 1.0kb upstream 1.0kb upstream 1000 false Scaffold24513: 418055-419054 Boechera stricta
Bostr.24513s0070 1.0kb downstream 1.0kb downstream 6240 true Scaffold24513: 419055-425294 Boechera stricta
Bostr.24513s0070 1.0kb downstream 1.0kb downstream 1000 false Scaffold24513: 424295-425294 Boechera stricta
Bostr.24513s0070 2.0kb upstream 2.0kb upstream 7240 true Scaffold24513: 417055-424294 Boechera stricta
Bostr.24513s0070 2.0kb upstream 2.0kb upstream 2000 false Scaffold24513: 417055-419054 Boechera stricta
Bostr.24513s0070 2.0kb downstream 2.0kb downstream 7240 true Scaffold24513: 419055-426294 Boechera stricta
Bostr.24513s0070 2.0kb downstream 2.0kb downstream 2000 false Scaffold24513: 424295-426294 Boechera stricta
Bostr.24513s0070 5.0kb upstream 5.0kb upstream 10240 true Scaffold24513: 414055-424294 Boechera stricta
Bostr.24513s0070 5.0kb upstream 5.0kb upstream 5000 false Scaffold24513: 414055-419054 Boechera stricta
Bostr.24513s0070 5.0kb downstream 5.0kb downstream 10240 true Scaffold24513: 419055-429294 Boechera stricta
Bostr.24513s0070 5.0kb downstream 5.0kb downstream 5000 false Scaffold24513: 424295-429294 Boechera stricta
Bostr.24513s0070 10.0kb upstream 10.0kb upstream 15240 true Scaffold24513: 409055-424294 Boechera stricta
Bostr.24513s0070 10.0kb upstream 10.0kb upstream 10000 false Scaffold24513: 409055-419054 Boechera stricta
Bostr.24513s0070 10.0kb downstream 10.0kb downstream 15240 true Scaffold24513: 419055-434294 Boechera stricta
Bostr.24513s0070 10.0kb downstream 10.0kb downstream 10000 false Scaffold24513: 424295-434294 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361785 5261 Brassicaceae View MSA
123836380 5264 Brassicales-Malvales View MSA
124348050 5266 SBM View MSA
124248365 5268 Malvidae View MSA
124071269 5270 Rosid View MSA
123742457 5271 Pentapetalae View MSA
122787924 5272 Eudicot View MSA
122045508 5273 Angiosperm View MSA
121343931 5274 Embryophyte View MSA
123428000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain