Gene : Bostr.24399s0031 B. stricta v1.2
Defline:  (1 of 1) PTHR22893:SF67 - 12-OXOPHYTODIENOATE REDUCTASE 3 Genomic Order:  31
Name:  ? Bostr.24399s0031 Secondary Identifier:  ? PAC:30659029
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-735 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.24399s0031 0.5kb upstream 0.5kb upstream 3194 true Scaffold24399: 626335-629528 Boechera stricta
Bostr.24399s0031 0.5kb upstream 0.5kb upstream 500 false Scaffold24399: 626335-626834 Boechera stricta
Bostr.24399s0031 0.5kb downstream 0.5kb downstream 3194 true Scaffold24399: 626835-630028 Boechera stricta
Bostr.24399s0031 0.5kb downstream 0.5kb downstream 500 false Scaffold24399: 629529-630028 Boechera stricta
Bostr.24399s0031 1.0kb upstream 1.0kb upstream 3694 true Scaffold24399: 625835-629528 Boechera stricta
Bostr.24399s0031 1.0kb upstream 1.0kb upstream 1000 false Scaffold24399: 625835-626834 Boechera stricta
Bostr.24399s0031 1.0kb downstream 1.0kb downstream 3694 true Scaffold24399: 626835-630528 Boechera stricta
Bostr.24399s0031 1.0kb downstream 1.0kb downstream 1000 false Scaffold24399: 629529-630528 Boechera stricta
Bostr.24399s0031 2.0kb upstream 2.0kb upstream 4694 true Scaffold24399: 624835-629528 Boechera stricta
Bostr.24399s0031 2.0kb upstream 2.0kb upstream 2000 false Scaffold24399: 624835-626834 Boechera stricta
Bostr.24399s0031 2.0kb downstream 2.0kb downstream 4694 true Scaffold24399: 626835-631528 Boechera stricta
Bostr.24399s0031 2.0kb downstream 2.0kb downstream 2000 false Scaffold24399: 629529-631528 Boechera stricta
Bostr.24399s0031 5.0kb upstream 5.0kb upstream 7694 true Scaffold24399: 621835-629528 Boechera stricta
Bostr.24399s0031 5.0kb upstream 5.0kb upstream 5000 false Scaffold24399: 621835-626834 Boechera stricta
Bostr.24399s0031 5.0kb downstream 5.0kb downstream 7694 true Scaffold24399: 626835-634528 Boechera stricta
Bostr.24399s0031 5.0kb downstream 5.0kb downstream 5000 false Scaffold24399: 629529-634528 Boechera stricta
Bostr.24399s0031 10.0kb upstream 10.0kb upstream 12694 true Scaffold24399: 616835-629528 Boechera stricta
Bostr.24399s0031 10.0kb upstream 10.0kb upstream 10000 false Scaffold24399: 616835-626834 Boechera stricta
Bostr.24399s0031 10.0kb downstream 10.0kb downstream 12694 true Scaffold24399: 626835-639528 Boechera stricta
Bostr.24399s0031 10.0kb downstream 10.0kb downstream 10000 false Scaffold24399: 629529-639528 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365075 5261 Brassicaceae View MSA
123829939 5264 Brassicales-Malvales View MSA
124321640 5266 SBM View MSA
124251945 5268 Malvidae View MSA
124067438 5270 Rosid View MSA
123752843 5271 Pentapetalae View MSA
122793200 5272 Eudicot View MSA
122045758 5273 Angiosperm View MSA
121351640 5274 Embryophyte View MSA
123428487 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain