Gene : Bostr.24513s0006 B. stricta v1.2
Defline:  (1 of 1) PTHR12725//PTHR12725:SF81 - HALOACID DEHALOGENASE-LIKE HYDROLASE Genomic Order:  6
Name:  ? Bostr.24513s0006 Secondary Identifier:  ? PAC:30677298
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7204 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.24513s0006 0.5kb upstream 0.5kb upstream 2263 true Scaffold24513: 40081-42343 Boechera stricta
Bostr.24513s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold24513: 41844-42343 Boechera stricta
Bostr.24513s0006 0.5kb downstream 0.5kb downstream 2263 true Scaffold24513: 39581-41843 Boechera stricta
Bostr.24513s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold24513: 39581-40080 Boechera stricta
Bostr.24513s0006 1.0kb upstream 1.0kb upstream 2763 true Scaffold24513: 40081-42843 Boechera stricta
Bostr.24513s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold24513: 41844-42843 Boechera stricta
Bostr.24513s0006 1.0kb downstream 1.0kb downstream 2763 true Scaffold24513: 39081-41843 Boechera stricta
Bostr.24513s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold24513: 39081-40080 Boechera stricta
Bostr.24513s0006 2.0kb upstream 2.0kb upstream 3763 true Scaffold24513: 40081-43843 Boechera stricta
Bostr.24513s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold24513: 41844-43843 Boechera stricta
Bostr.24513s0006 2.0kb downstream 2.0kb downstream 3763 true Scaffold24513: 38081-41843 Boechera stricta
Bostr.24513s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold24513: 38081-40080 Boechera stricta
Bostr.24513s0006 5.0kb upstream 5.0kb upstream 6763 true Scaffold24513: 40081-46843 Boechera stricta
Bostr.24513s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold24513: 41844-46843 Boechera stricta
Bostr.24513s0006 5.0kb downstream 5.0kb downstream 6763 true Scaffold24513: 35081-41843 Boechera stricta
Bostr.24513s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold24513: 35081-40080 Boechera stricta
Bostr.24513s0006 10.0kb upstream 10.0kb upstream 11763 true Scaffold24513: 40081-51843 Boechera stricta
Bostr.24513s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold24513: 41844-51843 Boechera stricta
Bostr.24513s0006 10.0kb downstream 10.0kb downstream 11763 true Scaffold24513: 30081-41843 Boechera stricta
Bostr.24513s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold24513: 30081-40080 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360172 5261 Brassicaceae View MSA
123829872 5264 Brassicales-Malvales View MSA
124339280 5266 SBM View MSA
124243356 5268 Malvidae View MSA
124062962 5270 Rosid View MSA
123740146 5271 Pentapetalae View MSA
122790968 5272 Eudicot View MSA
122048898 5273 Angiosperm View MSA
121311158 5274 Embryophyte View MSA
123426890 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain