Gene : Bostr.24513s0024 B. stricta v1.2
Defline:  (1 of 2) PTHR12741:SF9 - CALLOSE SYNTHASE 1-RELATED Genomic Order:  24
Name:  ? Bostr.24513s0024 Secondary Identifier:  ? PAC:30677274
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-6773 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.24513s0024 0.5kb upstream 0.5kb upstream 11943 true Scaffold24513: 152982-164924 Boechera stricta
Bostr.24513s0024 0.5kb upstream 0.5kb upstream 500 false Scaffold24513: 164425-164924 Boechera stricta
Bostr.24513s0024 0.5kb downstream 0.5kb downstream 11943 true Scaffold24513: 152482-164424 Boechera stricta
Bostr.24513s0024 0.5kb downstream 0.5kb downstream 500 false Scaffold24513: 152482-152981 Boechera stricta
Bostr.24513s0024 1.0kb upstream 1.0kb upstream 12443 true Scaffold24513: 152982-165424 Boechera stricta
Bostr.24513s0024 1.0kb upstream 1.0kb upstream 1000 false Scaffold24513: 164425-165424 Boechera stricta
Bostr.24513s0024 1.0kb downstream 1.0kb downstream 12443 true Scaffold24513: 151982-164424 Boechera stricta
Bostr.24513s0024 1.0kb downstream 1.0kb downstream 1000 false Scaffold24513: 151982-152981 Boechera stricta
Bostr.24513s0024 2.0kb upstream 2.0kb upstream 13443 true Scaffold24513: 152982-166424 Boechera stricta
Bostr.24513s0024 2.0kb upstream 2.0kb upstream 2000 false Scaffold24513: 164425-166424 Boechera stricta
Bostr.24513s0024 2.0kb downstream 2.0kb downstream 13443 true Scaffold24513: 150982-164424 Boechera stricta
Bostr.24513s0024 2.0kb downstream 2.0kb downstream 2000 false Scaffold24513: 150982-152981 Boechera stricta
Bostr.24513s0024 5.0kb upstream 5.0kb upstream 16443 true Scaffold24513: 152982-169424 Boechera stricta
Bostr.24513s0024 5.0kb upstream 5.0kb upstream 5000 false Scaffold24513: 164425-169424 Boechera stricta
Bostr.24513s0024 5.0kb downstream 5.0kb downstream 16443 true Scaffold24513: 147982-164424 Boechera stricta
Bostr.24513s0024 5.0kb downstream 5.0kb downstream 5000 false Scaffold24513: 147982-152981 Boechera stricta
Bostr.24513s0024 10.0kb upstream 10.0kb upstream 21443 true Scaffold24513: 152982-174424 Boechera stricta
Bostr.24513s0024 10.0kb upstream 10.0kb upstream 10000 false Scaffold24513: 164425-174424 Boechera stricta
Bostr.24513s0024 10.0kb downstream 10.0kb downstream 21443 true Scaffold24513: 142982-164424 Boechera stricta
Bostr.24513s0024 10.0kb downstream 10.0kb downstream 10000 false Scaffold24513: 142982-152981 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368152 5261 Brassicaceae View MSA
123839763 5264 Brassicales-Malvales View MSA
124346959 5266 SBM View MSA
124251802 5268 Malvidae View MSA
124072639 5270 Rosid View MSA
123745171 5271 Pentapetalae View MSA
122788947 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain