Gene : Bostr.24340s0002 B. stricta v1.2
Defline:  (1 of 1) KOG0435 - Leucyl-tRNA synthetase Genomic Order:  2
Name:  ? Bostr.24340s0002 Secondary Identifier:  ? PAC:30666759
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta TRNA-CHARGING-PWY Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.24340s0002 0.5kb upstream 0.5kb upstream 7198 true Scaffold24340: 10676-17873 Boechera stricta
Bostr.24340s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold24340: 10676-11175 Boechera stricta
Bostr.24340s0002 0.5kb downstream 0.5kb downstream 7198 true Scaffold24340: 11176-18373 Boechera stricta
Bostr.24340s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold24340: 17874-18373 Boechera stricta
Bostr.24340s0002 1.0kb upstream 1.0kb upstream 7698 true Scaffold24340: 10176-17873 Boechera stricta
Bostr.24340s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold24340: 10176-11175 Boechera stricta
Bostr.24340s0002 1.0kb downstream 1.0kb downstream 7698 true Scaffold24340: 11176-18873 Boechera stricta
Bostr.24340s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold24340: 17874-18873 Boechera stricta
Bostr.24340s0002 2.0kb upstream 2.0kb upstream 8698 true Scaffold24340: 9176-17873 Boechera stricta
Bostr.24340s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold24340: 9176-11175 Boechera stricta
Bostr.24340s0002 2.0kb downstream 2.0kb downstream 8698 true Scaffold24340: 11176-19873 Boechera stricta
Bostr.24340s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold24340: 17874-19873 Boechera stricta
Bostr.24340s0002 5.0kb upstream 5.0kb upstream 11698 true Scaffold24340: 6176-17873 Boechera stricta
Bostr.24340s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold24340: 6176-11175 Boechera stricta
Bostr.24340s0002 5.0kb downstream 5.0kb downstream 11698 true Scaffold24340: 11176-22873 Boechera stricta
Bostr.24340s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold24340: 17874-22873 Boechera stricta
Bostr.24340s0002 10.0kb upstream 10.0kb upstream 16698 true Scaffold24340: 1176-17873 Boechera stricta
Bostr.24340s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold24340: 1176-11175 Boechera stricta
Bostr.24340s0002 10.0kb downstream 10.0kb downstream 16698 true Scaffold24340: 11176-27873 Boechera stricta
Bostr.24340s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold24340: 17874-27873 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381070 5261 Brassicaceae View MSA
123803041 5264 Brassicales-Malvales View MSA
124350639 5266 SBM View MSA
124237752 5268 Malvidae View MSA
124066992 5270 Rosid View MSA
123752070 5271 Pentapetalae View MSA
122788218 5272 Eudicot View MSA
122045228 5273 Angiosperm View MSA
121348805 5274 Embryophyte View MSA
123424302 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain