Gene : Bostr.24340s0009 B. stricta v1.2
Defline:  (1 of 2) PTHR31388:SF37 - PEROXIDASE 4-RELATED Genomic Order:  9
Name:  ? Bostr.24340s0009 Secondary Identifier:  ? PAC:30666767
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5466 Boechera stricta pathologic  
Bstricta PWY-7214 Boechera stricta pathologic  
Bstricta PWY-7445 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.24340s0009 0.5kb upstream 0.5kb upstream 2124 true Scaffold24340: 61546-63669 Boechera stricta
Bostr.24340s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold24340: 63170-63669 Boechera stricta
Bostr.24340s0009 0.5kb downstream 0.5kb downstream 2124 true Scaffold24340: 61046-63169 Boechera stricta
Bostr.24340s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold24340: 61046-61545 Boechera stricta
Bostr.24340s0009 1.0kb upstream 1.0kb upstream 2624 true Scaffold24340: 61546-64169 Boechera stricta
Bostr.24340s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold24340: 63170-64169 Boechera stricta
Bostr.24340s0009 1.0kb downstream 1.0kb downstream 2624 true Scaffold24340: 60546-63169 Boechera stricta
Bostr.24340s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold24340: 60546-61545 Boechera stricta
Bostr.24340s0009 2.0kb upstream 2.0kb upstream 3624 true Scaffold24340: 61546-65169 Boechera stricta
Bostr.24340s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold24340: 63170-65169 Boechera stricta
Bostr.24340s0009 2.0kb downstream 2.0kb downstream 3624 true Scaffold24340: 59546-63169 Boechera stricta
Bostr.24340s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold24340: 59546-61545 Boechera stricta
Bostr.24340s0009 5.0kb upstream 5.0kb upstream 6624 true Scaffold24340: 61546-68169 Boechera stricta
Bostr.24340s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold24340: 63170-68169 Boechera stricta
Bostr.24340s0009 5.0kb downstream 5.0kb downstream 6624 true Scaffold24340: 56546-63169 Boechera stricta
Bostr.24340s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold24340: 56546-61545 Boechera stricta
Bostr.24340s0009 10.0kb upstream 10.0kb upstream 11624 true Scaffold24340: 61546-73169 Boechera stricta
Bostr.24340s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold24340: 63170-73169 Boechera stricta
Bostr.24340s0009 10.0kb downstream 10.0kb downstream 11624 true Scaffold24340: 51546-63169 Boechera stricta
Bostr.24340s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold24340: 51546-61545 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343534 5261 Brassicaceae View MSA
123836938 5264 Brassicales-Malvales View MSA
124322227 5266 SBM View MSA
124249111 5268 Malvidae View MSA
124068770 5270 Rosid View MSA
123752607 5271 Pentapetalae View MSA
122796741 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain