Gene : Bostr.23794s0852 B. stricta v1.2
Defline:  (1 of 3) PTHR13301:SF53 - CELLULOSE SYNTHASE-LIKE PROTEIN B1-RELATED Genomic Order:  852
Name:  ? Bostr.23794s0852 Secondary Identifier:  ? PAC:30651190
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-1001 Boechera stricta pathologic  

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.23794s0852 0.5kb upstream 0.5kb upstream 3174 true Scaffold23794: 4735449-4738622 Boechera stricta
Bostr.23794s0852 0.5kb upstream 0.5kb upstream 500 false Scaffold23794: 4738123-4738622 Boechera stricta
Bostr.23794s0852 0.5kb downstream 0.5kb downstream 3174 true Scaffold23794: 4734949-4738122 Boechera stricta
Bostr.23794s0852 0.5kb downstream 0.5kb downstream 500 false Scaffold23794: 4734949-4735448 Boechera stricta
Bostr.23794s0852 1.0kb upstream 1.0kb upstream 3674 true Scaffold23794: 4735449-4739122 Boechera stricta
Bostr.23794s0852 1.0kb upstream 1.0kb upstream 1000 false Scaffold23794: 4738123-4739122 Boechera stricta
Bostr.23794s0852 1.0kb downstream 1.0kb downstream 3674 true Scaffold23794: 4734449-4738122 Boechera stricta
Bostr.23794s0852 1.0kb downstream 1.0kb downstream 1000 false Scaffold23794: 4734449-4735448 Boechera stricta
Bostr.23794s0852 2.0kb upstream 2.0kb upstream 4674 true Scaffold23794: 4735449-4740122 Boechera stricta
Bostr.23794s0852 2.0kb upstream 2.0kb upstream 2000 false Scaffold23794: 4738123-4740122 Boechera stricta
Bostr.23794s0852 2.0kb downstream 2.0kb downstream 4674 true Scaffold23794: 4733449-4738122 Boechera stricta
Bostr.23794s0852 2.0kb downstream 2.0kb downstream 2000 false Scaffold23794: 4733449-4735448 Boechera stricta
Bostr.23794s0852 5.0kb upstream 5.0kb upstream 7674 true Scaffold23794: 4735449-4743122 Boechera stricta
Bostr.23794s0852 5.0kb upstream 5.0kb upstream 5000 false Scaffold23794: 4738123-4743122 Boechera stricta
Bostr.23794s0852 5.0kb downstream 5.0kb downstream 7674 true Scaffold23794: 4730449-4738122 Boechera stricta
Bostr.23794s0852 5.0kb downstream 5.0kb downstream 5000 false Scaffold23794: 4730449-4735448 Boechera stricta
Bostr.23794s0852 10.0kb upstream 10.0kb upstream 12674 true Scaffold23794: 4735449-4748122 Boechera stricta
Bostr.23794s0852 10.0kb upstream 10.0kb upstream 10000 false Scaffold23794: 4738123-4748122 Boechera stricta
Bostr.23794s0852 10.0kb downstream 10.0kb downstream 12674 true Scaffold23794: 4725449-4738122 Boechera stricta
Bostr.23794s0852 10.0kb downstream 10.0kb downstream 10000 false Scaffold23794: 4725449-4735448 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343850 5261 Brassicaceae View MSA
123783941 5264 Brassicales-Malvales View MSA
124349744 5266 SBM View MSA
124254069 5268 Malvidae View MSA
124073618 5270 Rosid View MSA
123753400 5271 Pentapetalae View MSA
122797245 5272 Eudicot View MSA
122051318 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain