Gene : Bostr.23794s0598 B. stricta v1.2
Defline:  (1 of 1) 2.1.2.3 - Phosphoribosylaminoimidazolecarboxamide formyltransferase / Aminoimidazolecarboxamide ribonucleotide transformylase Genomic Order:  598
Name:  ? Bostr.23794s0598 Secondary Identifier:  ? PAC:30651497
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-6124 Boechera stricta pathologic  
Bstricta PWY-841 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.23794s0598 0.5kb upstream 0.5kb upstream 3673 true Scaffold23794: 3411314-3414986 Boechera stricta
Bostr.23794s0598 0.5kb upstream 0.5kb upstream 500 false Scaffold23794: 3411314-3411813 Boechera stricta
Bostr.23794s0598 0.5kb downstream 0.5kb downstream 3673 true Scaffold23794: 3411814-3415486 Boechera stricta
Bostr.23794s0598 0.5kb downstream 0.5kb downstream 500 false Scaffold23794: 3414987-3415486 Boechera stricta
Bostr.23794s0598 1.0kb upstream 1.0kb upstream 4173 true Scaffold23794: 3410814-3414986 Boechera stricta
Bostr.23794s0598 1.0kb upstream 1.0kb upstream 1000 false Scaffold23794: 3410814-3411813 Boechera stricta
Bostr.23794s0598 1.0kb downstream 1.0kb downstream 4173 true Scaffold23794: 3411814-3415986 Boechera stricta
Bostr.23794s0598 1.0kb downstream 1.0kb downstream 1000 false Scaffold23794: 3414987-3415986 Boechera stricta
Bostr.23794s0598 2.0kb upstream 2.0kb upstream 5173 true Scaffold23794: 3409814-3414986 Boechera stricta
Bostr.23794s0598 2.0kb upstream 2.0kb upstream 2000 false Scaffold23794: 3409814-3411813 Boechera stricta
Bostr.23794s0598 2.0kb downstream 2.0kb downstream 5173 true Scaffold23794: 3411814-3416986 Boechera stricta
Bostr.23794s0598 2.0kb downstream 2.0kb downstream 2000 false Scaffold23794: 3414987-3416986 Boechera stricta
Bostr.23794s0598 5.0kb upstream 5.0kb upstream 8173 true Scaffold23794: 3406814-3414986 Boechera stricta
Bostr.23794s0598 5.0kb upstream 5.0kb upstream 5000 false Scaffold23794: 3406814-3411813 Boechera stricta
Bostr.23794s0598 5.0kb downstream 5.0kb downstream 8173 true Scaffold23794: 3411814-3419986 Boechera stricta
Bostr.23794s0598 5.0kb downstream 5.0kb downstream 5000 false Scaffold23794: 3414987-3419986 Boechera stricta
Bostr.23794s0598 10.0kb upstream 10.0kb upstream 13173 true Scaffold23794: 3401814-3414986 Boechera stricta
Bostr.23794s0598 10.0kb upstream 10.0kb upstream 10000 false Scaffold23794: 3401814-3411813 Boechera stricta
Bostr.23794s0598 10.0kb downstream 10.0kb downstream 13173 true Scaffold23794: 3411814-3424986 Boechera stricta
Bostr.23794s0598 10.0kb downstream 10.0kb downstream 10000 false Scaffold23794: 3414987-3424986 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365790 5261 Brassicaceae View MSA
123829206 5264 Brassicales-Malvales View MSA
124338939 5266 SBM View MSA
124238777 5268 Malvidae View MSA
124063677 5270 Rosid View MSA
123740756 5271 Pentapetalae View MSA
122787954 5272 Eudicot View MSA
122042847 5273 Angiosperm View MSA
121346530 5274 Embryophyte View MSA
123425039 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain