Gene : Bostr.23794s0652 B. stricta v1.2

Defline:  (1 of 1) PTHR12416:SF3 - RRNA-PROCESSING PROTEIN UTP23 HOMOLOG Genomic Order:  652
Name:  ? Bostr.23794s0652 Secondary Identifier:  ? PAC:30651352

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.23794s0652 0.5kb upstream 0.5kb upstream 2351 true Scaffold23794: 3691647-3693997 Boechera stricta
Bostr.23794s0652 0.5kb upstream 0.5kb upstream 500 false Scaffold23794: 3691647-3692146 Boechera stricta
Bostr.23794s0652 0.5kb downstream 0.5kb downstream 2351 true Scaffold23794: 3692147-3694497 Boechera stricta
Bostr.23794s0652 0.5kb downstream 0.5kb downstream 500 false Scaffold23794: 3693998-3694497 Boechera stricta
Bostr.23794s0652 1.0kb upstream 1.0kb upstream 2851 true Scaffold23794: 3691147-3693997 Boechera stricta
Bostr.23794s0652 1.0kb upstream 1.0kb upstream 1000 false Scaffold23794: 3691147-3692146 Boechera stricta
Bostr.23794s0652 1.0kb downstream 1.0kb downstream 2851 true Scaffold23794: 3692147-3694997 Boechera stricta
Bostr.23794s0652 1.0kb downstream 1.0kb downstream 1000 false Scaffold23794: 3693998-3694997 Boechera stricta
Bostr.23794s0652 2.0kb upstream 2.0kb upstream 3851 true Scaffold23794: 3690147-3693997 Boechera stricta
Bostr.23794s0652 2.0kb upstream 2.0kb upstream 2000 false Scaffold23794: 3690147-3692146 Boechera stricta
Bostr.23794s0652 2.0kb downstream 2.0kb downstream 3851 true Scaffold23794: 3692147-3695997 Boechera stricta
Bostr.23794s0652 2.0kb downstream 2.0kb downstream 2000 false Scaffold23794: 3693998-3695997 Boechera stricta
Bostr.23794s0652 5.0kb upstream 5.0kb upstream 6851 true Scaffold23794: 3687147-3693997 Boechera stricta
Bostr.23794s0652 5.0kb upstream 5.0kb upstream 5000 false Scaffold23794: 3687147-3692146 Boechera stricta
Bostr.23794s0652 5.0kb downstream 5.0kb downstream 6851 true Scaffold23794: 3692147-3698997 Boechera stricta
Bostr.23794s0652 5.0kb downstream 5.0kb downstream 5000 false Scaffold23794: 3693998-3698997 Boechera stricta
Bostr.23794s0652 10.0kb upstream 10.0kb upstream 11851 true Scaffold23794: 3682147-3693997 Boechera stricta
Bostr.23794s0652 10.0kb upstream 10.0kb upstream 10000 false Scaffold23794: 3682147-3692146 Boechera stricta
Bostr.23794s0652 10.0kb downstream 10.0kb downstream 11851 true Scaffold23794: 3692147-3703997 Boechera stricta
Bostr.23794s0652 10.0kb downstream 10.0kb downstream 10000 false Scaffold23794: 3693998-3703997 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365106 5261 Brassicaceae View MSA
123833830 5264 Brassicales-Malvales View MSA
124339210 5266 SBM View MSA
124239646 5268 Malvidae View MSA
124074295 5270 Rosid View MSA
123738427 5271 Pentapetalae View MSA
122793341 5272 Eudicot View MSA
122042240 5273 Angiosperm View MSA
121350234 5274 Embryophyte View MSA
123426184 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain