Gene : Bostr.25463s0140 B. stricta v1.2
Defline:  (1 of 3) PTHR18896:SF65 - PHOSPHOLIPASE D BETA 1-RELATED Genomic Order:  140
Name:  ? Bostr.25463s0140 Secondary Identifier:  ? PAC:30679915
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta LIPASYN-PWY Boechera stricta pathologic  
Bstricta PWY-3561 Boechera stricta pathologic  
Bstricta PWY-7039 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25463s0140 0.5kb upstream 0.5kb upstream 5048 true Scaffold25463: 1217458-1222505 Boechera stricta
Bostr.25463s0140 0.5kb upstream 0.5kb upstream 500 false Scaffold25463: 1217458-1217957 Boechera stricta
Bostr.25463s0140 0.5kb downstream 0.5kb downstream 5048 true Scaffold25463: 1217958-1223005 Boechera stricta
Bostr.25463s0140 0.5kb downstream 0.5kb downstream 500 false Scaffold25463: 1222506-1223005 Boechera stricta
Bostr.25463s0140 1.0kb upstream 1.0kb upstream 5548 true Scaffold25463: 1216958-1222505 Boechera stricta
Bostr.25463s0140 1.0kb upstream 1.0kb upstream 1000 false Scaffold25463: 1216958-1217957 Boechera stricta
Bostr.25463s0140 1.0kb downstream 1.0kb downstream 5548 true Scaffold25463: 1217958-1223505 Boechera stricta
Bostr.25463s0140 1.0kb downstream 1.0kb downstream 1000 false Scaffold25463: 1222506-1223505 Boechera stricta
Bostr.25463s0140 2.0kb upstream 2.0kb upstream 6548 true Scaffold25463: 1215958-1222505 Boechera stricta
Bostr.25463s0140 2.0kb upstream 2.0kb upstream 2000 false Scaffold25463: 1215958-1217957 Boechera stricta
Bostr.25463s0140 2.0kb downstream 2.0kb downstream 6548 true Scaffold25463: 1217958-1224505 Boechera stricta
Bostr.25463s0140 2.0kb downstream 2.0kb downstream 2000 false Scaffold25463: 1222506-1224505 Boechera stricta
Bostr.25463s0140 5.0kb upstream 5.0kb upstream 9548 true Scaffold25463: 1212958-1222505 Boechera stricta
Bostr.25463s0140 5.0kb upstream 5.0kb upstream 5000 false Scaffold25463: 1212958-1217957 Boechera stricta
Bostr.25463s0140 5.0kb downstream 5.0kb downstream 9548 true Scaffold25463: 1217958-1227505 Boechera stricta
Bostr.25463s0140 5.0kb downstream 5.0kb downstream 5000 false Scaffold25463: 1222506-1227505 Boechera stricta
Bostr.25463s0140 10.0kb upstream 10.0kb upstream 14548 true Scaffold25463: 1207958-1222505 Boechera stricta
Bostr.25463s0140 10.0kb upstream 10.0kb upstream 10000 false Scaffold25463: 1207958-1217957 Boechera stricta
Bostr.25463s0140 10.0kb downstream 10.0kb downstream 14548 true Scaffold25463: 1217958-1232505 Boechera stricta
Bostr.25463s0140 10.0kb downstream 10.0kb downstream 10000 false Scaffold25463: 1222506-1232505 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374010 5261 Brassicaceae View MSA
123838904 5264 Brassicales-Malvales View MSA
124342671 5266 SBM View MSA
124247063 5268 Malvidae View MSA
124072300 5270 Rosid View MSA
123749008 5271 Pentapetalae View MSA
122790888 5272 Eudicot View MSA
122043294 5273 Angiosperm View MSA
121349961 5274 Embryophyte View MSA
123381517 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain