Gene : Bostr.25463s0045 B. stricta v1.2

Defline:  (1 of 1) PTHR13011 - TFIIF-ALPHA Genomic Order:  45
Name:  ? Bostr.25463s0045 Secondary Identifier:  ? PAC:30679885

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25463s0045 0.5kb upstream 0.5kb upstream 3593 true Scaffold25463: 346220-349812 Boechera stricta
Bostr.25463s0045 0.5kb upstream 0.5kb upstream 500 false Scaffold25463: 349313-349812 Boechera stricta
Bostr.25463s0045 0.5kb downstream 0.5kb downstream 3593 true Scaffold25463: 345720-349312 Boechera stricta
Bostr.25463s0045 0.5kb downstream 0.5kb downstream 500 false Scaffold25463: 345720-346219 Boechera stricta
Bostr.25463s0045 1.0kb upstream 1.0kb upstream 4093 true Scaffold25463: 346220-350312 Boechera stricta
Bostr.25463s0045 1.0kb upstream 1.0kb upstream 1000 false Scaffold25463: 349313-350312 Boechera stricta
Bostr.25463s0045 1.0kb downstream 1.0kb downstream 4093 true Scaffold25463: 345220-349312 Boechera stricta
Bostr.25463s0045 1.0kb downstream 1.0kb downstream 1000 false Scaffold25463: 345220-346219 Boechera stricta
Bostr.25463s0045 2.0kb upstream 2.0kb upstream 5093 true Scaffold25463: 346220-351312 Boechera stricta
Bostr.25463s0045 2.0kb upstream 2.0kb upstream 2000 false Scaffold25463: 349313-351312 Boechera stricta
Bostr.25463s0045 2.0kb downstream 2.0kb downstream 5093 true Scaffold25463: 344220-349312 Boechera stricta
Bostr.25463s0045 2.0kb downstream 2.0kb downstream 2000 false Scaffold25463: 344220-346219 Boechera stricta
Bostr.25463s0045 5.0kb upstream 5.0kb upstream 8093 true Scaffold25463: 346220-354312 Boechera stricta
Bostr.25463s0045 5.0kb upstream 5.0kb upstream 5000 false Scaffold25463: 349313-354312 Boechera stricta
Bostr.25463s0045 5.0kb downstream 5.0kb downstream 8093 true Scaffold25463: 341220-349312 Boechera stricta
Bostr.25463s0045 5.0kb downstream 5.0kb downstream 5000 false Scaffold25463: 341220-346219 Boechera stricta
Bostr.25463s0045 10.0kb upstream 10.0kb upstream 13093 true Scaffold25463: 346220-359312 Boechera stricta
Bostr.25463s0045 10.0kb upstream 10.0kb upstream 10000 false Scaffold25463: 349313-359312 Boechera stricta
Bostr.25463s0045 10.0kb downstream 10.0kb downstream 13093 true Scaffold25463: 336220-349312 Boechera stricta
Bostr.25463s0045 10.0kb downstream 10.0kb downstream 10000 false Scaffold25463: 336220-346219 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370184 5261 Brassicaceae View MSA
123836960 5264 Brassicales-Malvales View MSA
124341306 5266 SBM View MSA
124237328 5268 Malvidae View MSA
124061584 5270 Rosid View MSA
123740754 5271 Pentapetalae View MSA
122785795 5272 Eudicot View MSA
122042161 5273 Angiosperm View MSA
121347251 5274 Embryophyte View MSA
123426399 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain