Gene : Bostr.25219s0553 B. stricta v1.2

Defline:  (1 of 10) PF05542 - Protein of unknown function (DUF760) (DUF760) Genomic Order:  553
Name:  ? Bostr.25219s0553 Secondary Identifier:  ? PAC:30671769

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25219s0553 0.5kb upstream 0.5kb upstream 2306 true Scaffold25219: 2628073-2630378 Boechera stricta
Bostr.25219s0553 0.5kb upstream 0.5kb upstream 500 false Scaffold25219: 2628073-2628572 Boechera stricta
Bostr.25219s0553 0.5kb downstream 0.5kb downstream 2306 true Scaffold25219: 2628573-2630878 Boechera stricta
Bostr.25219s0553 0.5kb downstream 0.5kb downstream 500 false Scaffold25219: 2630379-2630878 Boechera stricta
Bostr.25219s0553 1.0kb upstream 1.0kb upstream 2806 true Scaffold25219: 2627573-2630378 Boechera stricta
Bostr.25219s0553 1.0kb upstream 1.0kb upstream 1000 false Scaffold25219: 2627573-2628572 Boechera stricta
Bostr.25219s0553 1.0kb downstream 1.0kb downstream 2806 true Scaffold25219: 2628573-2631378 Boechera stricta
Bostr.25219s0553 1.0kb downstream 1.0kb downstream 1000 false Scaffold25219: 2630379-2631378 Boechera stricta
Bostr.25219s0553 2.0kb upstream 2.0kb upstream 3806 true Scaffold25219: 2626573-2630378 Boechera stricta
Bostr.25219s0553 2.0kb upstream 2.0kb upstream 2000 false Scaffold25219: 2626573-2628572 Boechera stricta
Bostr.25219s0553 2.0kb downstream 2.0kb downstream 3806 true Scaffold25219: 2628573-2632378 Boechera stricta
Bostr.25219s0553 2.0kb downstream 2.0kb downstream 2000 false Scaffold25219: 2630379-2632378 Boechera stricta
Bostr.25219s0553 5.0kb upstream 5.0kb upstream 6806 true Scaffold25219: 2623573-2630378 Boechera stricta
Bostr.25219s0553 5.0kb upstream 5.0kb upstream 5000 false Scaffold25219: 2623573-2628572 Boechera stricta
Bostr.25219s0553 5.0kb downstream 5.0kb downstream 6806 true Scaffold25219: 2628573-2635378 Boechera stricta
Bostr.25219s0553 5.0kb downstream 5.0kb downstream 5000 false Scaffold25219: 2630379-2635378 Boechera stricta
Bostr.25219s0553 10.0kb upstream 10.0kb upstream 11806 true Scaffold25219: 2618573-2630378 Boechera stricta
Bostr.25219s0553 10.0kb upstream 10.0kb upstream 10000 false Scaffold25219: 2618573-2628572 Boechera stricta
Bostr.25219s0553 10.0kb downstream 10.0kb downstream 11806 true Scaffold25219: 2628573-2640378 Boechera stricta
Bostr.25219s0553 10.0kb downstream 10.0kb downstream 10000 false Scaffold25219: 2630379-2640378 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373765 5261 Brassicaceae View MSA
123836185 5264 Brassicales-Malvales View MSA
124344586 5266 SBM View MSA
124241762 5268 Malvidae View MSA
124062530 5270 Rosid View MSA
123743837 5271 Pentapetalae View MSA
122792166 5272 Eudicot View MSA
122045353 5273 Angiosperm View MSA
121310438 5274 Embryophyte View MSA
123428654 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain