Gene : Bostr.25219s0444 B. stricta v1.2
Defline:  (1 of 2) PTHR31235:SF39 - PEROXIDASE 3-RELATED Genomic Order:  444
Name:  ? Bostr.25219s0444 Secondary Identifier:  ? PAC:30671403
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5466 Boechera stricta pathologic  
Bstricta PWY-7214 Boechera stricta pathologic  
Bstricta PWY-7445 Boechera stricta pathologic  

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25219s0444 0.5kb upstream 0.5kb upstream 2184 true Scaffold25219: 2015039-2017222 Boechera stricta
Bostr.25219s0444 0.5kb upstream 0.5kb upstream 500 false Scaffold25219: 2016723-2017222 Boechera stricta
Bostr.25219s0444 0.5kb downstream 0.5kb downstream 2184 true Scaffold25219: 2014539-2016722 Boechera stricta
Bostr.25219s0444 0.5kb downstream 0.5kb downstream 500 false Scaffold25219: 2014539-2015038 Boechera stricta
Bostr.25219s0444 1.0kb upstream 1.0kb upstream 2684 true Scaffold25219: 2015039-2017722 Boechera stricta
Bostr.25219s0444 1.0kb upstream 1.0kb upstream 1000 false Scaffold25219: 2016723-2017722 Boechera stricta
Bostr.25219s0444 1.0kb downstream 1.0kb downstream 2684 true Scaffold25219: 2014039-2016722 Boechera stricta
Bostr.25219s0444 1.0kb downstream 1.0kb downstream 1000 false Scaffold25219: 2014039-2015038 Boechera stricta
Bostr.25219s0444 2.0kb upstream 2.0kb upstream 3684 true Scaffold25219: 2015039-2018722 Boechera stricta
Bostr.25219s0444 2.0kb upstream 2.0kb upstream 2000 false Scaffold25219: 2016723-2018722 Boechera stricta
Bostr.25219s0444 2.0kb downstream 2.0kb downstream 3684 true Scaffold25219: 2013039-2016722 Boechera stricta
Bostr.25219s0444 2.0kb downstream 2.0kb downstream 2000 false Scaffold25219: 2013039-2015038 Boechera stricta
Bostr.25219s0444 5.0kb upstream 5.0kb upstream 6684 true Scaffold25219: 2015039-2021722 Boechera stricta
Bostr.25219s0444 5.0kb upstream 5.0kb upstream 5000 false Scaffold25219: 2016723-2021722 Boechera stricta
Bostr.25219s0444 5.0kb downstream 5.0kb downstream 6684 true Scaffold25219: 2010039-2016722 Boechera stricta
Bostr.25219s0444 5.0kb downstream 5.0kb downstream 5000 false Scaffold25219: 2010039-2015038 Boechera stricta
Bostr.25219s0444 10.0kb upstream 10.0kb upstream 11684 true Scaffold25219: 2015039-2026722 Boechera stricta
Bostr.25219s0444 10.0kb upstream 10.0kb upstream 10000 false Scaffold25219: 2016723-2026722 Boechera stricta
Bostr.25219s0444 10.0kb downstream 10.0kb downstream 11684 true Scaffold25219: 2005039-2016722 Boechera stricta
Bostr.25219s0444 10.0kb downstream 10.0kb downstream 10000 false Scaffold25219: 2005039-2015038 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369858 5261 Brassicaceae View MSA
123838755 5264 Brassicales-Malvales View MSA
124341557 5266 SBM View MSA
124250593 5268 Malvidae View MSA
124071148 5270 Rosid View MSA
123748177 5271 Pentapetalae View MSA
122794454 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain