Gene : Bostr.25219s0480 B. stricta v1.2
Defline:  (1 of 1) PTHR12526:SF360 - SUCROSE-PHOSPHATE SYNTHASE 3-RELATED Genomic Order:  480
Name:  ? Bostr.25219s0480 Secondary Identifier:  ? PAC:30671523
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7238 Boechera stricta pathologic  
Bstricta SUCSYN-PWY Boechera stricta pathologic  

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25219s0480 0.5kb upstream 0.5kb upstream 7623 true Scaffold25219: 2191634-2199256 Boechera stricta
Bostr.25219s0480 0.5kb upstream 0.5kb upstream 500 false Scaffold25219: 2191634-2192133 Boechera stricta
Bostr.25219s0480 0.5kb downstream 0.5kb downstream 7623 true Scaffold25219: 2192134-2199756 Boechera stricta
Bostr.25219s0480 0.5kb downstream 0.5kb downstream 500 false Scaffold25219: 2199257-2199756 Boechera stricta
Bostr.25219s0480 1.0kb upstream 1.0kb upstream 8123 true Scaffold25219: 2191134-2199256 Boechera stricta
Bostr.25219s0480 1.0kb upstream 1.0kb upstream 1000 false Scaffold25219: 2191134-2192133 Boechera stricta
Bostr.25219s0480 1.0kb downstream 1.0kb downstream 8123 true Scaffold25219: 2192134-2200256 Boechera stricta
Bostr.25219s0480 1.0kb downstream 1.0kb downstream 1000 false Scaffold25219: 2199257-2200256 Boechera stricta
Bostr.25219s0480 2.0kb upstream 2.0kb upstream 9123 true Scaffold25219: 2190134-2199256 Boechera stricta
Bostr.25219s0480 2.0kb upstream 2.0kb upstream 2000 false Scaffold25219: 2190134-2192133 Boechera stricta
Bostr.25219s0480 2.0kb downstream 2.0kb downstream 9123 true Scaffold25219: 2192134-2201256 Boechera stricta
Bostr.25219s0480 2.0kb downstream 2.0kb downstream 2000 false Scaffold25219: 2199257-2201256 Boechera stricta
Bostr.25219s0480 5.0kb upstream 5.0kb upstream 12123 true Scaffold25219: 2187134-2199256 Boechera stricta
Bostr.25219s0480 5.0kb upstream 5.0kb upstream 5000 false Scaffold25219: 2187134-2192133 Boechera stricta
Bostr.25219s0480 5.0kb downstream 5.0kb downstream 12123 true Scaffold25219: 2192134-2204256 Boechera stricta
Bostr.25219s0480 5.0kb downstream 5.0kb downstream 5000 false Scaffold25219: 2199257-2204256 Boechera stricta
Bostr.25219s0480 10.0kb upstream 10.0kb upstream 17123 true Scaffold25219: 2182134-2199256 Boechera stricta
Bostr.25219s0480 10.0kb upstream 10.0kb upstream 10000 false Scaffold25219: 2182134-2192133 Boechera stricta
Bostr.25219s0480 10.0kb downstream 10.0kb downstream 17123 true Scaffold25219: 2192134-2209256 Boechera stricta
Bostr.25219s0480 10.0kb downstream 10.0kb downstream 10000 false Scaffold25219: 2199257-2209256 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366462 5261 Brassicaceae View MSA
123832824 5264 Brassicales-Malvales View MSA
124340203 5266 SBM View MSA
124237932 5268 Malvidae View MSA
124060783 5270 Rosid View MSA
123737048 5271 Pentapetalae View MSA
122785600 5272 Eudicot View MSA
122049216 5273 Angiosperm View MSA
121347172 5274 Embryophyte View MSA
123427859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain