Gene : Bostr.25219s0415 B. stricta v1.2
Defline:  (1 of 2) PTHR12741:SF9 - CALLOSE SYNTHASE 1-RELATED Genomic Order:  415
Name:  ? Bostr.25219s0415 Secondary Identifier:  ? PAC:30671555
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-6773 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25219s0415 0.5kb upstream 0.5kb upstream 12178 true Scaffold25219: 1878438-1890615 Boechera stricta
Bostr.25219s0415 0.5kb upstream 0.5kb upstream 500 false Scaffold25219: 1878438-1878937 Boechera stricta
Bostr.25219s0415 0.5kb downstream 0.5kb downstream 12178 true Scaffold25219: 1878938-1891115 Boechera stricta
Bostr.25219s0415 0.5kb downstream 0.5kb downstream 500 false Scaffold25219: 1890616-1891115 Boechera stricta
Bostr.25219s0415 1.0kb upstream 1.0kb upstream 12678 true Scaffold25219: 1877938-1890615 Boechera stricta
Bostr.25219s0415 1.0kb upstream 1.0kb upstream 1000 false Scaffold25219: 1877938-1878937 Boechera stricta
Bostr.25219s0415 1.0kb downstream 1.0kb downstream 12678 true Scaffold25219: 1878938-1891615 Boechera stricta
Bostr.25219s0415 1.0kb downstream 1.0kb downstream 1000 false Scaffold25219: 1890616-1891615 Boechera stricta
Bostr.25219s0415 2.0kb upstream 2.0kb upstream 13678 true Scaffold25219: 1876938-1890615 Boechera stricta
Bostr.25219s0415 2.0kb upstream 2.0kb upstream 2000 false Scaffold25219: 1876938-1878937 Boechera stricta
Bostr.25219s0415 2.0kb downstream 2.0kb downstream 13678 true Scaffold25219: 1878938-1892615 Boechera stricta
Bostr.25219s0415 2.0kb downstream 2.0kb downstream 2000 false Scaffold25219: 1890616-1892615 Boechera stricta
Bostr.25219s0415 5.0kb upstream 5.0kb upstream 16678 true Scaffold25219: 1873938-1890615 Boechera stricta
Bostr.25219s0415 5.0kb upstream 5.0kb upstream 5000 false Scaffold25219: 1873938-1878937 Boechera stricta
Bostr.25219s0415 5.0kb downstream 5.0kb downstream 16678 true Scaffold25219: 1878938-1895615 Boechera stricta
Bostr.25219s0415 5.0kb downstream 5.0kb downstream 5000 false Scaffold25219: 1890616-1895615 Boechera stricta
Bostr.25219s0415 10.0kb upstream 10.0kb upstream 21678 true Scaffold25219: 1868938-1890615 Boechera stricta
Bostr.25219s0415 10.0kb upstream 10.0kb upstream 10000 false Scaffold25219: 1868938-1878937 Boechera stricta
Bostr.25219s0415 10.0kb downstream 10.0kb downstream 21678 true Scaffold25219: 1878938-1900615 Boechera stricta
Bostr.25219s0415 10.0kb downstream 10.0kb downstream 10000 false Scaffold25219: 1890616-1900615 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364153 5261 Brassicaceae View MSA
123798695 5264 Brassicales-Malvales View MSA
124346959 5266 SBM View MSA
124251802 5268 Malvidae View MSA
124072639 5270 Rosid View MSA
123745171 5271 Pentapetalae View MSA
122788947 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain