Gene : Bostr.25219s0301 B. stricta v1.2
Defline:  (1 of 1) PTHR11941:SF94 - 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 5 Genomic Order:  301
Name:  ? Bostr.25219s0301 Secondary Identifier:  ? PAC:30671937
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7574 Boechera stricta pathologic  
Bstricta VALDEG-PWY Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25219s0301 0.5kb upstream 0.5kb upstream 4006 true Scaffold25219: 1385242-1389247 Boechera stricta
Bostr.25219s0301 0.5kb upstream 0.5kb upstream 500 false Scaffold25219: 1385242-1385741 Boechera stricta
Bostr.25219s0301 0.5kb downstream 0.5kb downstream 4006 true Scaffold25219: 1385742-1389747 Boechera stricta
Bostr.25219s0301 0.5kb downstream 0.5kb downstream 500 false Scaffold25219: 1389248-1389747 Boechera stricta
Bostr.25219s0301 1.0kb upstream 1.0kb upstream 4506 true Scaffold25219: 1384742-1389247 Boechera stricta
Bostr.25219s0301 1.0kb upstream 1.0kb upstream 1000 false Scaffold25219: 1384742-1385741 Boechera stricta
Bostr.25219s0301 1.0kb downstream 1.0kb downstream 4506 true Scaffold25219: 1385742-1390247 Boechera stricta
Bostr.25219s0301 1.0kb downstream 1.0kb downstream 1000 false Scaffold25219: 1389248-1390247 Boechera stricta
Bostr.25219s0301 2.0kb upstream 2.0kb upstream 5506 true Scaffold25219: 1383742-1389247 Boechera stricta
Bostr.25219s0301 2.0kb upstream 2.0kb upstream 2000 false Scaffold25219: 1383742-1385741 Boechera stricta
Bostr.25219s0301 2.0kb downstream 2.0kb downstream 5506 true Scaffold25219: 1385742-1391247 Boechera stricta
Bostr.25219s0301 2.0kb downstream 2.0kb downstream 2000 false Scaffold25219: 1389248-1391247 Boechera stricta
Bostr.25219s0301 5.0kb upstream 5.0kb upstream 8506 true Scaffold25219: 1380742-1389247 Boechera stricta
Bostr.25219s0301 5.0kb upstream 5.0kb upstream 5000 false Scaffold25219: 1380742-1385741 Boechera stricta
Bostr.25219s0301 5.0kb downstream 5.0kb downstream 8506 true Scaffold25219: 1385742-1394247 Boechera stricta
Bostr.25219s0301 5.0kb downstream 5.0kb downstream 5000 false Scaffold25219: 1389248-1394247 Boechera stricta
Bostr.25219s0301 10.0kb upstream 10.0kb upstream 13506 true Scaffold25219: 1375742-1389247 Boechera stricta
Bostr.25219s0301 10.0kb upstream 10.0kb upstream 10000 false Scaffold25219: 1375742-1385741 Boechera stricta
Bostr.25219s0301 10.0kb downstream 10.0kb downstream 13506 true Scaffold25219: 1385742-1399247 Boechera stricta
Bostr.25219s0301 10.0kb downstream 10.0kb downstream 10000 false Scaffold25219: 1389248-1399247 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366385 5261 Brassicaceae View MSA
123833395 5264 Brassicales-Malvales View MSA
124342794 5266 SBM View MSA
124237152 5268 Malvidae View MSA
124061384 5270 Rosid View MSA
123736609 5271 Pentapetalae View MSA
122789369 5272 Eudicot View MSA
122044821 5273 Angiosperm View MSA
121345696 5274 Embryophyte View MSA
123428448 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain