Gene : Bostr.25219s0209 B. stricta v1.2

Defline:  (1 of 2) PTHR23076//PTHR23076:SF69 - METALLOPROTEASE M41 FTSH Genomic Order:  209
Name:  ? Bostr.25219s0209 Secondary Identifier:  ? PAC:30671750

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25219s0209 0.5kb upstream 0.5kb upstream 5784 true Scaffold25219: 984716-990499 Boechera stricta
Bostr.25219s0209 0.5kb upstream 0.5kb upstream 500 false Scaffold25219: 990000-990499 Boechera stricta
Bostr.25219s0209 0.5kb downstream 0.5kb downstream 5784 true Scaffold25219: 984216-989999 Boechera stricta
Bostr.25219s0209 0.5kb downstream 0.5kb downstream 500 false Scaffold25219: 984216-984715 Boechera stricta
Bostr.25219s0209 1.0kb upstream 1.0kb upstream 6284 true Scaffold25219: 984716-990999 Boechera stricta
Bostr.25219s0209 1.0kb upstream 1.0kb upstream 1000 false Scaffold25219: 990000-990999 Boechera stricta
Bostr.25219s0209 1.0kb downstream 1.0kb downstream 6284 true Scaffold25219: 983716-989999 Boechera stricta
Bostr.25219s0209 1.0kb downstream 1.0kb downstream 1000 false Scaffold25219: 983716-984715 Boechera stricta
Bostr.25219s0209 2.0kb upstream 2.0kb upstream 7284 true Scaffold25219: 984716-991999 Boechera stricta
Bostr.25219s0209 2.0kb upstream 2.0kb upstream 2000 false Scaffold25219: 990000-991999 Boechera stricta
Bostr.25219s0209 2.0kb downstream 2.0kb downstream 7284 true Scaffold25219: 982716-989999 Boechera stricta
Bostr.25219s0209 2.0kb downstream 2.0kb downstream 2000 false Scaffold25219: 982716-984715 Boechera stricta
Bostr.25219s0209 5.0kb upstream 5.0kb upstream 10284 true Scaffold25219: 984716-994999 Boechera stricta
Bostr.25219s0209 5.0kb upstream 5.0kb upstream 5000 false Scaffold25219: 990000-994999 Boechera stricta
Bostr.25219s0209 5.0kb downstream 5.0kb downstream 10284 true Scaffold25219: 979716-989999 Boechera stricta
Bostr.25219s0209 5.0kb downstream 5.0kb downstream 5000 false Scaffold25219: 979716-984715 Boechera stricta
Bostr.25219s0209 10.0kb upstream 10.0kb upstream 15284 true Scaffold25219: 984716-999999 Boechera stricta
Bostr.25219s0209 10.0kb upstream 10.0kb upstream 10000 false Scaffold25219: 990000-999999 Boechera stricta
Bostr.25219s0209 10.0kb downstream 10.0kb downstream 15284 true Scaffold25219: 974716-989999 Boechera stricta
Bostr.25219s0209 10.0kb downstream 10.0kb downstream 10000 false Scaffold25219: 974716-984715 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361248 5261 Brassicaceae View MSA
123837441 5264 Brassicales-Malvales View MSA
124336403 5266 SBM View MSA
124245446 5268 Malvidae View MSA
124064309 5270 Rosid View MSA
123736600 5271 Pentapetalae View MSA
122793293 5272 Eudicot View MSA
122047667 5273 Angiosperm View MSA
121345143 5274 Embryophyte View MSA
123426820 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain