Gene : Bostr.25219s0080 B. stricta v1.2
Defline:  (1 of 1) PTHR33372:SF1 - CHLOROPLAST J-LIKE DOMAIN 1-CONTAINING PROTEIN Genomic Order:  80
Name:  ? Bostr.25219s0080 Secondary Identifier:  ? PAC:30671549
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25219s0080 0.5kb upstream 0.5kb upstream 3487 true Scaffold25219: 371645-375131 Boechera stricta
Bostr.25219s0080 0.5kb upstream 0.5kb upstream 500 false Scaffold25219: 371645-372144 Boechera stricta
Bostr.25219s0080 0.5kb downstream 0.5kb downstream 3487 true Scaffold25219: 372145-375631 Boechera stricta
Bostr.25219s0080 0.5kb downstream 0.5kb downstream 500 false Scaffold25219: 375132-375631 Boechera stricta
Bostr.25219s0080 1.0kb upstream 1.0kb upstream 3987 true Scaffold25219: 371145-375131 Boechera stricta
Bostr.25219s0080 1.0kb upstream 1.0kb upstream 1000 false Scaffold25219: 371145-372144 Boechera stricta
Bostr.25219s0080 1.0kb downstream 1.0kb downstream 3987 true Scaffold25219: 372145-376131 Boechera stricta
Bostr.25219s0080 1.0kb downstream 1.0kb downstream 1000 false Scaffold25219: 375132-376131 Boechera stricta
Bostr.25219s0080 2.0kb upstream 2.0kb upstream 4987 true Scaffold25219: 370145-375131 Boechera stricta
Bostr.25219s0080 2.0kb upstream 2.0kb upstream 2000 false Scaffold25219: 370145-372144 Boechera stricta
Bostr.25219s0080 2.0kb downstream 2.0kb downstream 4987 true Scaffold25219: 372145-377131 Boechera stricta
Bostr.25219s0080 2.0kb downstream 2.0kb downstream 2000 false Scaffold25219: 375132-377131 Boechera stricta
Bostr.25219s0080 5.0kb upstream 5.0kb upstream 7987 true Scaffold25219: 367145-375131 Boechera stricta
Bostr.25219s0080 5.0kb upstream 5.0kb upstream 5000 false Scaffold25219: 367145-372144 Boechera stricta
Bostr.25219s0080 5.0kb downstream 5.0kb downstream 7987 true Scaffold25219: 372145-380131 Boechera stricta
Bostr.25219s0080 5.0kb downstream 5.0kb downstream 5000 false Scaffold25219: 375132-380131 Boechera stricta
Bostr.25219s0080 10.0kb upstream 10.0kb upstream 12987 true Scaffold25219: 362145-375131 Boechera stricta
Bostr.25219s0080 10.0kb upstream 10.0kb upstream 10000 false Scaffold25219: 362145-372144 Boechera stricta
Bostr.25219s0080 10.0kb downstream 10.0kb downstream 12987 true Scaffold25219: 372145-385131 Boechera stricta
Bostr.25219s0080 10.0kb downstream 10.0kb downstream 10000 false Scaffold25219: 375132-385131 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364278 5261 Brassicaceae View MSA
123831162 5264 Brassicales-Malvales View MSA
124345315 5266 SBM View MSA
124244811 5268 Malvidae View MSA
124063539 5270 Rosid View MSA
123738014 5271 Pentapetalae View MSA
122791822 5272 Eudicot View MSA
122045556 5273 Angiosperm View MSA
121344488 5274 Embryophyte View MSA
123428806 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain