Gene : Bostr.25993s0252 B. stricta v1.2
Defline:  (1 of 2) PTHR31707:SF11 - PECTINESTERASE/PECTINESTERASE INHIBITOR 17-RELATED Genomic Order:  252
Name:  ? Bostr.25993s0252 Secondary Identifier:  ? PAC:30667880
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-1081 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25993s0252 0.5kb upstream 0.5kb upstream 2948 true Scaffold25993: 1231786-1234733 Boechera stricta
Bostr.25993s0252 0.5kb upstream 0.5kb upstream 500 false Scaffold25993: 1231786-1232285 Boechera stricta
Bostr.25993s0252 0.5kb downstream 0.5kb downstream 2948 true Scaffold25993: 1232286-1235233 Boechera stricta
Bostr.25993s0252 0.5kb downstream 0.5kb downstream 500 false Scaffold25993: 1234734-1235233 Boechera stricta
Bostr.25993s0252 1.0kb upstream 1.0kb upstream 3448 true Scaffold25993: 1231286-1234733 Boechera stricta
Bostr.25993s0252 1.0kb upstream 1.0kb upstream 1000 false Scaffold25993: 1231286-1232285 Boechera stricta
Bostr.25993s0252 1.0kb downstream 1.0kb downstream 3448 true Scaffold25993: 1232286-1235733 Boechera stricta
Bostr.25993s0252 1.0kb downstream 1.0kb downstream 1000 false Scaffold25993: 1234734-1235733 Boechera stricta
Bostr.25993s0252 2.0kb upstream 2.0kb upstream 4448 true Scaffold25993: 1230286-1234733 Boechera stricta
Bostr.25993s0252 2.0kb upstream 2.0kb upstream 2000 false Scaffold25993: 1230286-1232285 Boechera stricta
Bostr.25993s0252 2.0kb downstream 2.0kb downstream 4448 true Scaffold25993: 1232286-1236733 Boechera stricta
Bostr.25993s0252 2.0kb downstream 2.0kb downstream 2000 false Scaffold25993: 1234734-1236733 Boechera stricta
Bostr.25993s0252 5.0kb upstream 5.0kb upstream 7448 true Scaffold25993: 1227286-1234733 Boechera stricta
Bostr.25993s0252 5.0kb upstream 5.0kb upstream 5000 false Scaffold25993: 1227286-1232285 Boechera stricta
Bostr.25993s0252 5.0kb downstream 5.0kb downstream 7448 true Scaffold25993: 1232286-1239733 Boechera stricta
Bostr.25993s0252 5.0kb downstream 5.0kb downstream 5000 false Scaffold25993: 1234734-1239733 Boechera stricta
Bostr.25993s0252 10.0kb upstream 10.0kb upstream 12448 true Scaffold25993: 1222286-1234733 Boechera stricta
Bostr.25993s0252 10.0kb upstream 10.0kb upstream 10000 false Scaffold25993: 1222286-1232285 Boechera stricta
Bostr.25993s0252 10.0kb downstream 10.0kb downstream 12448 true Scaffold25993: 1232286-1244733 Boechera stricta
Bostr.25993s0252 10.0kb downstream 10.0kb downstream 10000 false Scaffold25993: 1234734-1244733 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367798 5261 Brassicaceae View MSA
123832667 5264 Brassicales-Malvales View MSA
124337029 5266 SBM View MSA
124245744 5268 Malvidae View MSA
124070854 5270 Rosid View MSA
123751128 5271 Pentapetalae View MSA
122793966 5272 Eudicot View MSA
122051530 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain