Gene : Bostr.25993s0110 B. stricta v1.2

Defline:  (1 of 2) PTHR33868:SF2 - EXPRESSED PROTEIN Genomic Order:  110
Name:  ? Bostr.25993s0110 Secondary Identifier:  ? PAC:30667530

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25993s0110 0.5kb upstream 0.5kb upstream 2611 true Scaffold25993: 580662-583272 Boechera stricta
Bostr.25993s0110 0.5kb upstream 0.5kb upstream 500 false Scaffold25993: 580662-581161 Boechera stricta
Bostr.25993s0110 0.5kb downstream 0.5kb downstream 2611 true Scaffold25993: 581162-583772 Boechera stricta
Bostr.25993s0110 0.5kb downstream 0.5kb downstream 500 false Scaffold25993: 583273-583772 Boechera stricta
Bostr.25993s0110 1.0kb upstream 1.0kb upstream 3111 true Scaffold25993: 580162-583272 Boechera stricta
Bostr.25993s0110 1.0kb upstream 1.0kb upstream 1000 false Scaffold25993: 580162-581161 Boechera stricta
Bostr.25993s0110 1.0kb downstream 1.0kb downstream 3111 true Scaffold25993: 581162-584272 Boechera stricta
Bostr.25993s0110 1.0kb downstream 1.0kb downstream 1000 false Scaffold25993: 583273-584272 Boechera stricta
Bostr.25993s0110 2.0kb upstream 2.0kb upstream 4111 true Scaffold25993: 579162-583272 Boechera stricta
Bostr.25993s0110 2.0kb upstream 2.0kb upstream 2000 false Scaffold25993: 579162-581161 Boechera stricta
Bostr.25993s0110 2.0kb downstream 2.0kb downstream 4111 true Scaffold25993: 581162-585272 Boechera stricta
Bostr.25993s0110 2.0kb downstream 2.0kb downstream 2000 false Scaffold25993: 583273-585272 Boechera stricta
Bostr.25993s0110 5.0kb upstream 5.0kb upstream 7111 true Scaffold25993: 576162-583272 Boechera stricta
Bostr.25993s0110 5.0kb upstream 5.0kb upstream 5000 false Scaffold25993: 576162-581161 Boechera stricta
Bostr.25993s0110 5.0kb downstream 5.0kb downstream 7111 true Scaffold25993: 581162-588272 Boechera stricta
Bostr.25993s0110 5.0kb downstream 5.0kb downstream 5000 false Scaffold25993: 583273-588272 Boechera stricta
Bostr.25993s0110 10.0kb upstream 10.0kb upstream 12111 true Scaffold25993: 571162-583272 Boechera stricta
Bostr.25993s0110 10.0kb upstream 10.0kb upstream 10000 false Scaffold25993: 571162-581161 Boechera stricta
Bostr.25993s0110 10.0kb downstream 10.0kb downstream 12111 true Scaffold25993: 581162-593272 Boechera stricta
Bostr.25993s0110 10.0kb downstream 10.0kb downstream 10000 false Scaffold25993: 583273-593272 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362210 5261 Brassicaceae View MSA
123828693 5264 Brassicales-Malvales View MSA
124345501 5266 SBM View MSA
124249341 5268 Malvidae View MSA
124070490 5270 Rosid View MSA
123747466 5271 Pentapetalae View MSA
122788794 5272 Eudicot View MSA
122043778 5273 Angiosperm View MSA
121348592 5274 Embryophyte View MSA
123380930 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain