Gene : Bostr.25993s0145 B. stricta v1.2

Defline:  (1 of 1) KOG3165 - Predicted nucleic-acid-binding protein, contains PIN domain Genomic Order:  145
Name:  ? Bostr.25993s0145 Secondary Identifier:  ? PAC:30667707

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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25993s0145 0.5kb upstream 0.5kb upstream 2276 true Scaffold25993: 786991-789266 Boechera stricta
Bostr.25993s0145 0.5kb upstream 0.5kb upstream 500 false Scaffold25993: 786991-787490 Boechera stricta
Bostr.25993s0145 0.5kb downstream 0.5kb downstream 2276 true Scaffold25993: 787491-789766 Boechera stricta
Bostr.25993s0145 0.5kb downstream 0.5kb downstream 500 false Scaffold25993: 789267-789766 Boechera stricta
Bostr.25993s0145 1.0kb upstream 1.0kb upstream 2776 true Scaffold25993: 786491-789266 Boechera stricta
Bostr.25993s0145 1.0kb upstream 1.0kb upstream 1000 false Scaffold25993: 786491-787490 Boechera stricta
Bostr.25993s0145 1.0kb downstream 1.0kb downstream 2776 true Scaffold25993: 787491-790266 Boechera stricta
Bostr.25993s0145 1.0kb downstream 1.0kb downstream 1000 false Scaffold25993: 789267-790266 Boechera stricta
Bostr.25993s0145 2.0kb upstream 2.0kb upstream 3776 true Scaffold25993: 785491-789266 Boechera stricta
Bostr.25993s0145 2.0kb upstream 2.0kb upstream 2000 false Scaffold25993: 785491-787490 Boechera stricta
Bostr.25993s0145 2.0kb downstream 2.0kb downstream 3776 true Scaffold25993: 787491-791266 Boechera stricta
Bostr.25993s0145 2.0kb downstream 2.0kb downstream 2000 false Scaffold25993: 789267-791266 Boechera stricta
Bostr.25993s0145 5.0kb upstream 5.0kb upstream 6776 true Scaffold25993: 782491-789266 Boechera stricta
Bostr.25993s0145 5.0kb upstream 5.0kb upstream 5000 false Scaffold25993: 782491-787490 Boechera stricta
Bostr.25993s0145 5.0kb downstream 5.0kb downstream 6776 true Scaffold25993: 787491-794266 Boechera stricta
Bostr.25993s0145 5.0kb downstream 5.0kb downstream 5000 false Scaffold25993: 789267-794266 Boechera stricta
Bostr.25993s0145 10.0kb upstream 10.0kb upstream 11776 true Scaffold25993: 777491-789266 Boechera stricta
Bostr.25993s0145 10.0kb upstream 10.0kb upstream 10000 false Scaffold25993: 777491-787490 Boechera stricta
Bostr.25993s0145 10.0kb downstream 10.0kb downstream 11776 true Scaffold25993: 787491-799266 Boechera stricta
Bostr.25993s0145 10.0kb downstream 10.0kb downstream 10000 false Scaffold25993: 789267-799266 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365032 5261 Brassicaceae View MSA
123829493 5264 Brassicales-Malvales View MSA
124343317 5266 SBM View MSA
124242937 5268 Malvidae View MSA
124074295 5270 Rosid View MSA
123738427 5271 Pentapetalae View MSA
122793341 5272 Eudicot View MSA
122042240 5273 Angiosperm View MSA
121350234 5274 Embryophyte View MSA
123426184 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain