Gene : Bostr.25993s0276 B. stricta v1.2
Defline:  (1 of 1) PTHR23163:SF3 - E3 UBIQUITIN-PROTEIN LIGASE BRE1-LIKE 1 Genomic Order:  276
Name:  ? Bostr.25993s0276 Secondary Identifier:  ? PAC:30667725
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7511 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25993s0276 0.5kb upstream 0.5kb upstream 7006 true Scaffold25993: 1355248-1362253 Boechera stricta
Bostr.25993s0276 0.5kb upstream 0.5kb upstream 500 false Scaffold25993: 1355248-1355747 Boechera stricta
Bostr.25993s0276 0.5kb downstream 0.5kb downstream 7006 true Scaffold25993: 1355748-1362753 Boechera stricta
Bostr.25993s0276 0.5kb downstream 0.5kb downstream 500 false Scaffold25993: 1362254-1362753 Boechera stricta
Bostr.25993s0276 1.0kb upstream 1.0kb upstream 7506 true Scaffold25993: 1354748-1362253 Boechera stricta
Bostr.25993s0276 1.0kb upstream 1.0kb upstream 1000 false Scaffold25993: 1354748-1355747 Boechera stricta
Bostr.25993s0276 1.0kb downstream 1.0kb downstream 7506 true Scaffold25993: 1355748-1363253 Boechera stricta
Bostr.25993s0276 1.0kb downstream 1.0kb downstream 1000 false Scaffold25993: 1362254-1363253 Boechera stricta
Bostr.25993s0276 2.0kb upstream 2.0kb upstream 8506 true Scaffold25993: 1353748-1362253 Boechera stricta
Bostr.25993s0276 2.0kb upstream 2.0kb upstream 2000 false Scaffold25993: 1353748-1355747 Boechera stricta
Bostr.25993s0276 2.0kb downstream 2.0kb downstream 8506 true Scaffold25993: 1355748-1364253 Boechera stricta
Bostr.25993s0276 2.0kb downstream 2.0kb downstream 2000 false Scaffold25993: 1362254-1364253 Boechera stricta
Bostr.25993s0276 5.0kb upstream 5.0kb upstream 11506 true Scaffold25993: 1350748-1362253 Boechera stricta
Bostr.25993s0276 5.0kb upstream 5.0kb upstream 5000 false Scaffold25993: 1350748-1355747 Boechera stricta
Bostr.25993s0276 5.0kb downstream 5.0kb downstream 11506 true Scaffold25993: 1355748-1367253 Boechera stricta
Bostr.25993s0276 5.0kb downstream 5.0kb downstream 5000 false Scaffold25993: 1362254-1367253 Boechera stricta
Bostr.25993s0276 10.0kb upstream 10.0kb upstream 16506 true Scaffold25993: 1345748-1362253 Boechera stricta
Bostr.25993s0276 10.0kb upstream 10.0kb upstream 10000 false Scaffold25993: 1345748-1355747 Boechera stricta
Bostr.25993s0276 10.0kb downstream 10.0kb downstream 16506 true Scaffold25993: 1355748-1372253 Boechera stricta
Bostr.25993s0276 10.0kb downstream 10.0kb downstream 10000 false Scaffold25993: 1362254-1372253 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364133 5261 Brassicaceae View MSA
123841035 5264 Brassicales-Malvales View MSA
124344060 5266 SBM View MSA
124251962 5268 Malvidae View MSA
124061906 5270 Rosid View MSA
123753299 5271 Pentapetalae View MSA
122793673 5272 Eudicot View MSA
122042098 5273 Angiosperm View MSA
121349326 5274 Embryophyte View MSA
123423997 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain