Gene : Bostr.25542s0173 B. stricta v1.2
Defline:  (1 of 2) 1.10.3.2//1.10.3.3 - Laccase / Urishiol oxidase // L-ascorbate oxidase / Ascorbase Genomic Order:  173
Name:  ? Bostr.25542s0173 Secondary Identifier:  ? PAC:30672254
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5466 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25542s0173 0.5kb upstream 0.5kb upstream 2919 true Scaffold25542: 783400-786318 Boechera stricta
Bostr.25542s0173 0.5kb upstream 0.5kb upstream 500 false Scaffold25542: 783400-783899 Boechera stricta
Bostr.25542s0173 0.5kb downstream 0.5kb downstream 2919 true Scaffold25542: 783900-786818 Boechera stricta
Bostr.25542s0173 0.5kb downstream 0.5kb downstream 500 false Scaffold25542: 786319-786818 Boechera stricta
Bostr.25542s0173 1.0kb upstream 1.0kb upstream 3419 true Scaffold25542: 782900-786318 Boechera stricta
Bostr.25542s0173 1.0kb upstream 1.0kb upstream 1000 false Scaffold25542: 782900-783899 Boechera stricta
Bostr.25542s0173 1.0kb downstream 1.0kb downstream 3419 true Scaffold25542: 783900-787318 Boechera stricta
Bostr.25542s0173 1.0kb downstream 1.0kb downstream 1000 false Scaffold25542: 786319-787318 Boechera stricta
Bostr.25542s0173 2.0kb upstream 2.0kb upstream 4419 true Scaffold25542: 781900-786318 Boechera stricta
Bostr.25542s0173 2.0kb upstream 2.0kb upstream 2000 false Scaffold25542: 781900-783899 Boechera stricta
Bostr.25542s0173 2.0kb downstream 2.0kb downstream 4419 true Scaffold25542: 783900-788318 Boechera stricta
Bostr.25542s0173 2.0kb downstream 2.0kb downstream 2000 false Scaffold25542: 786319-788318 Boechera stricta
Bostr.25542s0173 5.0kb upstream 5.0kb upstream 7419 true Scaffold25542: 778900-786318 Boechera stricta
Bostr.25542s0173 5.0kb upstream 5.0kb upstream 5000 false Scaffold25542: 778900-783899 Boechera stricta
Bostr.25542s0173 5.0kb downstream 5.0kb downstream 7419 true Scaffold25542: 783900-791318 Boechera stricta
Bostr.25542s0173 5.0kb downstream 5.0kb downstream 5000 false Scaffold25542: 786319-791318 Boechera stricta
Bostr.25542s0173 10.0kb upstream 10.0kb upstream 12419 true Scaffold25542: 773900-786318 Boechera stricta
Bostr.25542s0173 10.0kb upstream 10.0kb upstream 10000 false Scaffold25542: 773900-783899 Boechera stricta
Bostr.25542s0173 10.0kb downstream 10.0kb downstream 12419 true Scaffold25542: 783900-796318 Boechera stricta
Bostr.25542s0173 10.0kb downstream 10.0kb downstream 10000 false Scaffold25542: 786319-796318 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373963 5261 Brassicaceae View MSA
123836254 5264 Brassicales-Malvales View MSA
124342178 5266 SBM View MSA
124254383 5268 Malvidae View MSA
124065870 5270 Rosid View MSA
123745907 5271 Pentapetalae View MSA
122793198 5272 Eudicot View MSA
122046121 5273 Angiosperm View MSA
121348734 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain