Gene : Bostr.25542s0240 B. stricta v1.2

Defline:  (1 of 2) PTHR24326:SF252 - HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT9 Genomic Order:  240
Name:  ? Bostr.25542s0240 Secondary Identifier:  ? PAC:30672187

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25542s0240 0.5kb upstream 0.5kb upstream 1982 true Scaffold25542: 1057787-1059768 Boechera stricta
Bostr.25542s0240 0.5kb upstream 0.5kb upstream 500 false Scaffold25542: 1059269-1059768 Boechera stricta
Bostr.25542s0240 0.5kb downstream 0.5kb downstream 1982 true Scaffold25542: 1057287-1059268 Boechera stricta
Bostr.25542s0240 0.5kb downstream 0.5kb downstream 500 false Scaffold25542: 1057287-1057786 Boechera stricta
Bostr.25542s0240 1.0kb upstream 1.0kb upstream 2482 true Scaffold25542: 1057787-1060268 Boechera stricta
Bostr.25542s0240 1.0kb upstream 1.0kb upstream 1000 false Scaffold25542: 1059269-1060268 Boechera stricta
Bostr.25542s0240 1.0kb downstream 1.0kb downstream 2482 true Scaffold25542: 1056787-1059268 Boechera stricta
Bostr.25542s0240 1.0kb downstream 1.0kb downstream 1000 false Scaffold25542: 1056787-1057786 Boechera stricta
Bostr.25542s0240 2.0kb upstream 2.0kb upstream 3482 true Scaffold25542: 1057787-1061268 Boechera stricta
Bostr.25542s0240 2.0kb upstream 2.0kb upstream 2000 false Scaffold25542: 1059269-1061268 Boechera stricta
Bostr.25542s0240 2.0kb downstream 2.0kb downstream 3482 true Scaffold25542: 1055787-1059268 Boechera stricta
Bostr.25542s0240 2.0kb downstream 2.0kb downstream 2000 false Scaffold25542: 1055787-1057786 Boechera stricta
Bostr.25542s0240 5.0kb upstream 5.0kb upstream 6482 true Scaffold25542: 1057787-1064268 Boechera stricta
Bostr.25542s0240 5.0kb upstream 5.0kb upstream 5000 false Scaffold25542: 1059269-1064268 Boechera stricta
Bostr.25542s0240 5.0kb downstream 5.0kb downstream 6482 true Scaffold25542: 1052787-1059268 Boechera stricta
Bostr.25542s0240 5.0kb downstream 5.0kb downstream 5000 false Scaffold25542: 1052787-1057786 Boechera stricta
Bostr.25542s0240 10.0kb upstream 10.0kb upstream 11482 true Scaffold25542: 1057787-1069268 Boechera stricta
Bostr.25542s0240 10.0kb upstream 10.0kb upstream 10000 false Scaffold25542: 1059269-1069268 Boechera stricta
Bostr.25542s0240 10.0kb downstream 10.0kb downstream 11482 true Scaffold25542: 1047787-1059268 Boechera stricta
Bostr.25542s0240 10.0kb downstream 10.0kb downstream 10000 false Scaffold25542: 1047787-1057786 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379171 5261 Brassicaceae View MSA
123829025 5264 Brassicales-Malvales View MSA
124349854 5266 SBM View MSA
124237549 5268 Malvidae View MSA
124064901 5270 Rosid View MSA
123747506 5271 Pentapetalae View MSA
122796686 5272 Eudicot View MSA
122050134 5273 Angiosperm View MSA
121351534 5274 Embryophyte View MSA
123382211 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain