Gene : Bostr.25542s0110 B. stricta v1.2

Defline:  (1 of 4) PTHR10743:SF2 - PROTEIN RER1B-RELATED Genomic Order:  110
Name:  ? Bostr.25542s0110 Secondary Identifier:  ? PAC:30672142

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25542s0110 0.5kb upstream 0.5kb upstream 2895 true Scaffold25542: 458459-461353 Boechera stricta
Bostr.25542s0110 0.5kb upstream 0.5kb upstream 500 false Scaffold25542: 458459-458958 Boechera stricta
Bostr.25542s0110 0.5kb downstream 0.5kb downstream 2895 true Scaffold25542: 458959-461853 Boechera stricta
Bostr.25542s0110 0.5kb downstream 0.5kb downstream 500 false Scaffold25542: 461354-461853 Boechera stricta
Bostr.25542s0110 1.0kb upstream 1.0kb upstream 3395 true Scaffold25542: 457959-461353 Boechera stricta
Bostr.25542s0110 1.0kb upstream 1.0kb upstream 1000 false Scaffold25542: 457959-458958 Boechera stricta
Bostr.25542s0110 1.0kb downstream 1.0kb downstream 3395 true Scaffold25542: 458959-462353 Boechera stricta
Bostr.25542s0110 1.0kb downstream 1.0kb downstream 1000 false Scaffold25542: 461354-462353 Boechera stricta
Bostr.25542s0110 2.0kb upstream 2.0kb upstream 4395 true Scaffold25542: 456959-461353 Boechera stricta
Bostr.25542s0110 2.0kb upstream 2.0kb upstream 2000 false Scaffold25542: 456959-458958 Boechera stricta
Bostr.25542s0110 2.0kb downstream 2.0kb downstream 4395 true Scaffold25542: 458959-463353 Boechera stricta
Bostr.25542s0110 2.0kb downstream 2.0kb downstream 2000 false Scaffold25542: 461354-463353 Boechera stricta
Bostr.25542s0110 5.0kb upstream 5.0kb upstream 7395 true Scaffold25542: 453959-461353 Boechera stricta
Bostr.25542s0110 5.0kb upstream 5.0kb upstream 5000 false Scaffold25542: 453959-458958 Boechera stricta
Bostr.25542s0110 5.0kb downstream 5.0kb downstream 7395 true Scaffold25542: 458959-466353 Boechera stricta
Bostr.25542s0110 5.0kb downstream 5.0kb downstream 5000 false Scaffold25542: 461354-466353 Boechera stricta
Bostr.25542s0110 10.0kb upstream 10.0kb upstream 12395 true Scaffold25542: 448959-461353 Boechera stricta
Bostr.25542s0110 10.0kb upstream 10.0kb upstream 10000 false Scaffold25542: 448959-458958 Boechera stricta
Bostr.25542s0110 10.0kb downstream 10.0kb downstream 12395 true Scaffold25542: 458959-471353 Boechera stricta
Bostr.25542s0110 10.0kb downstream 10.0kb downstream 10000 false Scaffold25542: 461354-471353 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361086 5261 Brassicaceae View MSA
123841246 5264 Brassicales-Malvales View MSA
124338953 5266 SBM View MSA
124253453 5268 Malvidae View MSA
124071881 5270 Rosid View MSA
123745031 5271 Pentapetalae View MSA
122794273 5272 Eudicot View MSA
122048346 5273 Angiosperm View MSA
121345453 5274 Embryophyte View MSA
123424083 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain