Gene : Bostr.25542s0039 B. stricta v1.2
Defline:  (1 of 2) PTHR10336:SF105 - PHOSPHOINOSITIDE PHOSPHOLIPASE C 1-RELATED Genomic Order:  39
Name:  ? Bostr.25542s0039 Secondary Identifier:  ? PAC:30672352
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta LIPASYN-PWY Boechera stricta pathologic  
Bstricta PWY-6351 Boechera stricta pathologic  
Bstricta PWY-6367 Boechera stricta pathologic  
Bstricta PWY-7039 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25542s0039 0.5kb upstream 0.5kb upstream 2901 true Scaffold25542: 147114-150014 Boechera stricta
Bostr.25542s0039 0.5kb upstream 0.5kb upstream 500 false Scaffold25542: 147114-147613 Boechera stricta
Bostr.25542s0039 0.5kb downstream 0.5kb downstream 2901 true Scaffold25542: 147614-150514 Boechera stricta
Bostr.25542s0039 0.5kb downstream 0.5kb downstream 500 false Scaffold25542: 150015-150514 Boechera stricta
Bostr.25542s0039 1.0kb upstream 1.0kb upstream 3401 true Scaffold25542: 146614-150014 Boechera stricta
Bostr.25542s0039 1.0kb upstream 1.0kb upstream 1000 false Scaffold25542: 146614-147613 Boechera stricta
Bostr.25542s0039 1.0kb downstream 1.0kb downstream 3401 true Scaffold25542: 147614-151014 Boechera stricta
Bostr.25542s0039 1.0kb downstream 1.0kb downstream 1000 false Scaffold25542: 150015-151014 Boechera stricta
Bostr.25542s0039 2.0kb upstream 2.0kb upstream 4401 true Scaffold25542: 145614-150014 Boechera stricta
Bostr.25542s0039 2.0kb upstream 2.0kb upstream 2000 false Scaffold25542: 145614-147613 Boechera stricta
Bostr.25542s0039 2.0kb downstream 2.0kb downstream 4401 true Scaffold25542: 147614-152014 Boechera stricta
Bostr.25542s0039 2.0kb downstream 2.0kb downstream 2000 false Scaffold25542: 150015-152014 Boechera stricta
Bostr.25542s0039 5.0kb upstream 5.0kb upstream 7401 true Scaffold25542: 142614-150014 Boechera stricta
Bostr.25542s0039 5.0kb upstream 5.0kb upstream 5000 false Scaffold25542: 142614-147613 Boechera stricta
Bostr.25542s0039 5.0kb downstream 5.0kb downstream 7401 true Scaffold25542: 147614-155014 Boechera stricta
Bostr.25542s0039 5.0kb downstream 5.0kb downstream 5000 false Scaffold25542: 150015-155014 Boechera stricta
Bostr.25542s0039 10.0kb upstream 10.0kb upstream 12401 true Scaffold25542: 137614-150014 Boechera stricta
Bostr.25542s0039 10.0kb upstream 10.0kb upstream 10000 false Scaffold25542: 137614-147613 Boechera stricta
Bostr.25542s0039 10.0kb downstream 10.0kb downstream 12401 true Scaffold25542: 147614-160014 Boechera stricta
Bostr.25542s0039 10.0kb downstream 10.0kb downstream 10000 false Scaffold25542: 150015-160014 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361806 5261 Brassicaceae View MSA
123798250 5264 Brassicales-Malvales View MSA
124295917 5266 SBM View MSA
124148223 5268 Malvidae View MSA
123874264 5270 Rosid View MSA
123458265 5271 Pentapetalae View MSA
122796639 5272 Eudicot View MSA
122046719 5273 Angiosperm View MSA
121351735 5274 Embryophyte View MSA
123428200 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain