Gene : Bostr.25463s0425 B. stricta v1.2
Defline:  (1 of 1) PF12546 - Blue/Ultraviolet sensing protein C terminal (Cryptochrome_C) Genomic Order:  425
Name:  ? Bostr.25463s0425 Secondary Identifier:  ? PAC:30680281
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25463s0425 0.5kb upstream 0.5kb upstream 3640 true Scaffold25463: 3652628-3656267 Boechera stricta
Bostr.25463s0425 0.5kb upstream 0.5kb upstream 500 false Scaffold25463: 3652628-3653127 Boechera stricta
Bostr.25463s0425 0.5kb downstream 0.5kb downstream 3640 true Scaffold25463: 3653128-3656767 Boechera stricta
Bostr.25463s0425 0.5kb downstream 0.5kb downstream 500 false Scaffold25463: 3656268-3656767 Boechera stricta
Bostr.25463s0425 1.0kb upstream 1.0kb upstream 4140 true Scaffold25463: 3652128-3656267 Boechera stricta
Bostr.25463s0425 1.0kb upstream 1.0kb upstream 1000 false Scaffold25463: 3652128-3653127 Boechera stricta
Bostr.25463s0425 1.0kb downstream 1.0kb downstream 4140 true Scaffold25463: 3653128-3657267 Boechera stricta
Bostr.25463s0425 1.0kb downstream 1.0kb downstream 1000 false Scaffold25463: 3656268-3657267 Boechera stricta
Bostr.25463s0425 2.0kb upstream 2.0kb upstream 5140 true Scaffold25463: 3651128-3656267 Boechera stricta
Bostr.25463s0425 2.0kb upstream 2.0kb upstream 2000 false Scaffold25463: 3651128-3653127 Boechera stricta
Bostr.25463s0425 2.0kb downstream 2.0kb downstream 5140 true Scaffold25463: 3653128-3658267 Boechera stricta
Bostr.25463s0425 2.0kb downstream 2.0kb downstream 2000 false Scaffold25463: 3656268-3658267 Boechera stricta
Bostr.25463s0425 5.0kb upstream 5.0kb upstream 8140 true Scaffold25463: 3648128-3656267 Boechera stricta
Bostr.25463s0425 5.0kb upstream 5.0kb upstream 5000 false Scaffold25463: 3648128-3653127 Boechera stricta
Bostr.25463s0425 5.0kb downstream 5.0kb downstream 8140 true Scaffold25463: 3653128-3661267 Boechera stricta
Bostr.25463s0425 5.0kb downstream 5.0kb downstream 5000 false Scaffold25463: 3656268-3661267 Boechera stricta
Bostr.25463s0425 10.0kb upstream 10.0kb upstream 13140 true Scaffold25463: 3643128-3656267 Boechera stricta
Bostr.25463s0425 10.0kb upstream 10.0kb upstream 10000 false Scaffold25463: 3643128-3653127 Boechera stricta
Bostr.25463s0425 10.0kb downstream 10.0kb downstream 13140 true Scaffold25463: 3653128-3666267 Boechera stricta
Bostr.25463s0425 10.0kb downstream 10.0kb downstream 10000 false Scaffold25463: 3656268-3666267 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361385 5261 Brassicaceae View MSA
123835973 5264 Brassicales-Malvales View MSA
124344257 5266 SBM View MSA
124239665 5268 Malvidae View MSA
124068248 5270 Rosid View MSA
123736970 5271 Pentapetalae View MSA
122788964 5272 Eudicot View MSA
122048329 5273 Angiosperm View MSA
121343845 5274 Embryophyte View MSA
123428792 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain