Gene : Bostr.25494s0007 B. stricta v1.2
Defline:  (1 of 4) PTHR10366:SF362 - ALCOHOL DEHYDROGENASE-RELATED Genomic Order:  7
Name:  ? Bostr.25494s0007 Secondary Identifier:  ? PAC:30662674
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-361 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25494s0007 0.5kb upstream 0.5kb upstream 2649 true Scaffold25494: 29445-32093 Boechera stricta
Bostr.25494s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold25494: 29445-29944 Boechera stricta
Bostr.25494s0007 0.5kb downstream 0.5kb downstream 2649 true Scaffold25494: 29945-32593 Boechera stricta
Bostr.25494s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold25494: 32094-32593 Boechera stricta
Bostr.25494s0007 1.0kb upstream 1.0kb upstream 3149 true Scaffold25494: 28945-32093 Boechera stricta
Bostr.25494s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold25494: 28945-29944 Boechera stricta
Bostr.25494s0007 1.0kb downstream 1.0kb downstream 3149 true Scaffold25494: 29945-33093 Boechera stricta
Bostr.25494s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold25494: 32094-33093 Boechera stricta
Bostr.25494s0007 2.0kb upstream 2.0kb upstream 4149 true Scaffold25494: 27945-32093 Boechera stricta
Bostr.25494s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold25494: 27945-29944 Boechera stricta
Bostr.25494s0007 2.0kb downstream 2.0kb downstream 4149 true Scaffold25494: 29945-34093 Boechera stricta
Bostr.25494s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold25494: 32094-34093 Boechera stricta
Bostr.25494s0007 5.0kb upstream 5.0kb upstream 7149 true Scaffold25494: 24945-32093 Boechera stricta
Bostr.25494s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold25494: 24945-29944 Boechera stricta
Bostr.25494s0007 5.0kb downstream 5.0kb downstream 7149 true Scaffold25494: 29945-37093 Boechera stricta
Bostr.25494s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold25494: 32094-37093 Boechera stricta
Bostr.25494s0007 10.0kb upstream 10.0kb upstream 12149 true Scaffold25494: 19945-32093 Boechera stricta
Bostr.25494s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold25494: 19945-29944 Boechera stricta
Bostr.25494s0007 10.0kb downstream 10.0kb downstream 12149 true Scaffold25494: 29945-42093 Boechera stricta
Bostr.25494s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold25494: 32094-42093 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510262 5273 Angiosperm View MSA
122361344 5261 Brassicaceae View MSA
123798141 5264 Brassicales-Malvales View MSA
124295816 5266 SBM View MSA
124148149 5268 Malvidae View MSA
123874205 5270 Rosid View MSA
123458212 5271 Pentapetalae View MSA
122493621 5272 Eudicot View MSA
120783368 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain