Gene : Bostr.25463s0286 B. stricta v1.2
Defline:  (1 of 3) 6.1.1.5 - Isoleucine--tRNA ligase / Isoleucyl-tRNA synthetase Genomic Order:  286
Name:  ? Bostr.25463s0286 Secondary Identifier:  ? PAC:30679891
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta TRNA-CHARGING-PWY Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25463s0286 0.5kb upstream 0.5kb upstream 8295 true Scaffold25463: 2453492-2461786 Boechera stricta
Bostr.25463s0286 0.5kb upstream 0.5kb upstream 500 false Scaffold25463: 2453492-2453991 Boechera stricta
Bostr.25463s0286 0.5kb downstream 0.5kb downstream 8295 true Scaffold25463: 2453992-2462286 Boechera stricta
Bostr.25463s0286 0.5kb downstream 0.5kb downstream 500 false Scaffold25463: 2461787-2462286 Boechera stricta
Bostr.25463s0286 1.0kb upstream 1.0kb upstream 8795 true Scaffold25463: 2452992-2461786 Boechera stricta
Bostr.25463s0286 1.0kb upstream 1.0kb upstream 1000 false Scaffold25463: 2452992-2453991 Boechera stricta
Bostr.25463s0286 1.0kb downstream 1.0kb downstream 8795 true Scaffold25463: 2453992-2462786 Boechera stricta
Bostr.25463s0286 1.0kb downstream 1.0kb downstream 1000 false Scaffold25463: 2461787-2462786 Boechera stricta
Bostr.25463s0286 2.0kb upstream 2.0kb upstream 9795 true Scaffold25463: 2451992-2461786 Boechera stricta
Bostr.25463s0286 2.0kb upstream 2.0kb upstream 2000 false Scaffold25463: 2451992-2453991 Boechera stricta
Bostr.25463s0286 2.0kb downstream 2.0kb downstream 9795 true Scaffold25463: 2453992-2463786 Boechera stricta
Bostr.25463s0286 2.0kb downstream 2.0kb downstream 2000 false Scaffold25463: 2461787-2463786 Boechera stricta
Bostr.25463s0286 5.0kb upstream 5.0kb upstream 12795 true Scaffold25463: 2448992-2461786 Boechera stricta
Bostr.25463s0286 5.0kb upstream 5.0kb upstream 5000 false Scaffold25463: 2448992-2453991 Boechera stricta
Bostr.25463s0286 5.0kb downstream 5.0kb downstream 12795 true Scaffold25463: 2453992-2466786 Boechera stricta
Bostr.25463s0286 5.0kb downstream 5.0kb downstream 5000 false Scaffold25463: 2461787-2466786 Boechera stricta
Bostr.25463s0286 10.0kb upstream 10.0kb upstream 17795 true Scaffold25463: 2443992-2461786 Boechera stricta
Bostr.25463s0286 10.0kb upstream 10.0kb upstream 10000 false Scaffold25463: 2443992-2453991 Boechera stricta
Bostr.25463s0286 10.0kb downstream 10.0kb downstream 17795 true Scaffold25463: 2453992-2471786 Boechera stricta
Bostr.25463s0286 10.0kb downstream 10.0kb downstream 10000 false Scaffold25463: 2461787-2471786 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041086 5273 Angiosperm View MSA
122375550 5261 Brassicaceae View MSA
123831002 5264 Brassicales-Malvales View MSA
124350072 5266 SBM View MSA
124238585 5268 Malvidae View MSA
124063415 5270 Rosid View MSA
123737064 5271 Pentapetalae View MSA
122787980 5272 Eudicot View MSA
121346625 5274 Embryophyte View MSA
123428554 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain