Gene : Bostr.25463s0304 B. stricta v1.2
Defline:  (1 of 1) PTHR12526:SF358 - SUCROSE-PHOSPHATE SYNTHASE 4-RELATED Genomic Order:  304
Name:  ? Bostr.25463s0304 Secondary Identifier:  ? PAC:30680193
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7238 Boechera stricta pathologic  
Bstricta SUCSYN-PWY Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25463s0304 0.5kb upstream 0.5kb upstream 5878 true Scaffold25463: 2545492-2551369 Boechera stricta
Bostr.25463s0304 0.5kb upstream 0.5kb upstream 500 false Scaffold25463: 2550870-2551369 Boechera stricta
Bostr.25463s0304 0.5kb downstream 0.5kb downstream 5878 true Scaffold25463: 2544992-2550869 Boechera stricta
Bostr.25463s0304 0.5kb downstream 0.5kb downstream 500 false Scaffold25463: 2544992-2545491 Boechera stricta
Bostr.25463s0304 1.0kb upstream 1.0kb upstream 6378 true Scaffold25463: 2545492-2551869 Boechera stricta
Bostr.25463s0304 1.0kb upstream 1.0kb upstream 1000 false Scaffold25463: 2550870-2551869 Boechera stricta
Bostr.25463s0304 1.0kb downstream 1.0kb downstream 6378 true Scaffold25463: 2544492-2550869 Boechera stricta
Bostr.25463s0304 1.0kb downstream 1.0kb downstream 1000 false Scaffold25463: 2544492-2545491 Boechera stricta
Bostr.25463s0304 2.0kb upstream 2.0kb upstream 7378 true Scaffold25463: 2545492-2552869 Boechera stricta
Bostr.25463s0304 2.0kb upstream 2.0kb upstream 2000 false Scaffold25463: 2550870-2552869 Boechera stricta
Bostr.25463s0304 2.0kb downstream 2.0kb downstream 7378 true Scaffold25463: 2543492-2550869 Boechera stricta
Bostr.25463s0304 2.0kb downstream 2.0kb downstream 2000 false Scaffold25463: 2543492-2545491 Boechera stricta
Bostr.25463s0304 5.0kb upstream 5.0kb upstream 10378 true Scaffold25463: 2545492-2555869 Boechera stricta
Bostr.25463s0304 5.0kb upstream 5.0kb upstream 5000 false Scaffold25463: 2550870-2555869 Boechera stricta
Bostr.25463s0304 5.0kb downstream 5.0kb downstream 10378 true Scaffold25463: 2540492-2550869 Boechera stricta
Bostr.25463s0304 5.0kb downstream 5.0kb downstream 5000 false Scaffold25463: 2540492-2545491 Boechera stricta
Bostr.25463s0304 10.0kb upstream 10.0kb upstream 15378 true Scaffold25463: 2545492-2560869 Boechera stricta
Bostr.25463s0304 10.0kb upstream 10.0kb upstream 10000 false Scaffold25463: 2550870-2560869 Boechera stricta
Bostr.25463s0304 10.0kb downstream 10.0kb downstream 15378 true Scaffold25463: 2535492-2550869 Boechera stricta
Bostr.25463s0304 10.0kb downstream 10.0kb downstream 10000 false Scaffold25463: 2535492-2545491 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368905 5261 Brassicaceae View MSA
123828474 5264 Brassicales-Malvales View MSA
124344153 5266 SBM View MSA
124242048 5268 Malvidae View MSA
124060943 5270 Rosid View MSA
123740520 5271 Pentapetalae View MSA
122786711 5272 Eudicot View MSA
122049216 5273 Angiosperm View MSA
121347172 5274 Embryophyte View MSA
123427859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain