Gene : Bostr.25463s0342 B. stricta v1.2
Defline:  (1 of 2) PTHR22603:SF39 - CHOLINE KINASE 1-RELATED Genomic Order:  342
Name:  ? Bostr.25463s0342 Secondary Identifier:  ? PAC:30680016
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-3385 Boechera stricta pathologic  
Bstricta PWY3O-450 Boechera stricta pathologic  
Bstricta PWY4FS-6 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25463s0342 0.5kb upstream 0.5kb upstream 3324 true Scaffold25463: 2919717-2923040 Boechera stricta
Bostr.25463s0342 0.5kb upstream 0.5kb upstream 500 false Scaffold25463: 2919717-2920216 Boechera stricta
Bostr.25463s0342 0.5kb downstream 0.5kb downstream 3324 true Scaffold25463: 2920217-2923540 Boechera stricta
Bostr.25463s0342 0.5kb downstream 0.5kb downstream 500 false Scaffold25463: 2923041-2923540 Boechera stricta
Bostr.25463s0342 1.0kb upstream 1.0kb upstream 3824 true Scaffold25463: 2919217-2923040 Boechera stricta
Bostr.25463s0342 1.0kb upstream 1.0kb upstream 1000 false Scaffold25463: 2919217-2920216 Boechera stricta
Bostr.25463s0342 1.0kb downstream 1.0kb downstream 3824 true Scaffold25463: 2920217-2924040 Boechera stricta
Bostr.25463s0342 1.0kb downstream 1.0kb downstream 1000 false Scaffold25463: 2923041-2924040 Boechera stricta
Bostr.25463s0342 2.0kb upstream 2.0kb upstream 4824 true Scaffold25463: 2918217-2923040 Boechera stricta
Bostr.25463s0342 2.0kb upstream 2.0kb upstream 2000 false Scaffold25463: 2918217-2920216 Boechera stricta
Bostr.25463s0342 2.0kb downstream 2.0kb downstream 4824 true Scaffold25463: 2920217-2925040 Boechera stricta
Bostr.25463s0342 2.0kb downstream 2.0kb downstream 2000 false Scaffold25463: 2923041-2925040 Boechera stricta
Bostr.25463s0342 5.0kb upstream 5.0kb upstream 7824 true Scaffold25463: 2915217-2923040 Boechera stricta
Bostr.25463s0342 5.0kb upstream 5.0kb upstream 5000 false Scaffold25463: 2915217-2920216 Boechera stricta
Bostr.25463s0342 5.0kb downstream 5.0kb downstream 7824 true Scaffold25463: 2920217-2928040 Boechera stricta
Bostr.25463s0342 5.0kb downstream 5.0kb downstream 5000 false Scaffold25463: 2923041-2928040 Boechera stricta
Bostr.25463s0342 10.0kb upstream 10.0kb upstream 12824 true Scaffold25463: 2910217-2923040 Boechera stricta
Bostr.25463s0342 10.0kb upstream 10.0kb upstream 10000 false Scaffold25463: 2910217-2920216 Boechera stricta
Bostr.25463s0342 10.0kb downstream 10.0kb downstream 12824 true Scaffold25463: 2920217-2933040 Boechera stricta
Bostr.25463s0342 10.0kb downstream 10.0kb downstream 10000 false Scaffold25463: 2923041-2933040 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372650 5261 Brassicaceae View MSA
123840519 5264 Brassicales-Malvales View MSA
124340711 5266 SBM View MSA
124247486 5268 Malvidae View MSA
124069180 5270 Rosid View MSA
123746925 5271 Pentapetalae View MSA
122797485 5272 Eudicot View MSA
122047896 5273 Angiosperm View MSA
121347088 5274 Embryophyte View MSA
123426626 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain