Gene : Bostr.25463s0344 B. stricta v1.2
Defline:  (1 of 3) PTHR11200:SF128 - TYPE I INOSITOL 1,4,5-TRISPHOSPHATE 5-PHOSPHATASE 1 Genomic Order:  344
Name:  ? Bostr.25463s0344 Secondary Identifier:  ? PAC:30679918
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-6358 Boechera stricta pathologic  
Bstricta PWY-6363 Boechera stricta pathologic  
Bstricta PWY-6364 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25463s0344 0.5kb upstream 0.5kb upstream 3668 true Scaffold25463: 2927309-2930976 Boechera stricta
Bostr.25463s0344 0.5kb upstream 0.5kb upstream 500 false Scaffold25463: 2927309-2927808 Boechera stricta
Bostr.25463s0344 0.5kb downstream 0.5kb downstream 3668 true Scaffold25463: 2927809-2931476 Boechera stricta
Bostr.25463s0344 0.5kb downstream 0.5kb downstream 500 false Scaffold25463: 2930977-2931476 Boechera stricta
Bostr.25463s0344 1.0kb upstream 1.0kb upstream 4168 true Scaffold25463: 2926809-2930976 Boechera stricta
Bostr.25463s0344 1.0kb upstream 1.0kb upstream 1000 false Scaffold25463: 2926809-2927808 Boechera stricta
Bostr.25463s0344 1.0kb downstream 1.0kb downstream 4168 true Scaffold25463: 2927809-2931976 Boechera stricta
Bostr.25463s0344 1.0kb downstream 1.0kb downstream 1000 false Scaffold25463: 2930977-2931976 Boechera stricta
Bostr.25463s0344 2.0kb upstream 2.0kb upstream 5168 true Scaffold25463: 2925809-2930976 Boechera stricta
Bostr.25463s0344 2.0kb upstream 2.0kb upstream 2000 false Scaffold25463: 2925809-2927808 Boechera stricta
Bostr.25463s0344 2.0kb downstream 2.0kb downstream 5168 true Scaffold25463: 2927809-2932976 Boechera stricta
Bostr.25463s0344 2.0kb downstream 2.0kb downstream 2000 false Scaffold25463: 2930977-2932976 Boechera stricta
Bostr.25463s0344 5.0kb upstream 5.0kb upstream 8168 true Scaffold25463: 2922809-2930976 Boechera stricta
Bostr.25463s0344 5.0kb upstream 5.0kb upstream 5000 false Scaffold25463: 2922809-2927808 Boechera stricta
Bostr.25463s0344 5.0kb downstream 5.0kb downstream 8168 true Scaffold25463: 2927809-2935976 Boechera stricta
Bostr.25463s0344 5.0kb downstream 5.0kb downstream 5000 false Scaffold25463: 2930977-2935976 Boechera stricta
Bostr.25463s0344 10.0kb upstream 10.0kb upstream 13168 true Scaffold25463: 2917809-2930976 Boechera stricta
Bostr.25463s0344 10.0kb upstream 10.0kb upstream 10000 false Scaffold25463: 2917809-2927808 Boechera stricta
Bostr.25463s0344 10.0kb downstream 10.0kb downstream 13168 true Scaffold25463: 2927809-2940976 Boechera stricta
Bostr.25463s0344 10.0kb downstream 10.0kb downstream 10000 false Scaffold25463: 2930977-2940976 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370213 5261 Brassicaceae View MSA
123839810 5264 Brassicales-Malvales View MSA
124339394 5266 SBM View MSA
124241049 5268 Malvidae View MSA
124064481 5270 Rosid View MSA
123740737 5271 Pentapetalae View MSA
122795494 5272 Eudicot View MSA
122042148 5273 Angiosperm View MSA
121350777 5274 Embryophyte View MSA
123427535 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain