Gene : Bostr.26527s0247 B. stricta v1.2
Defline:  (1 of 1) 2.5.1.22//2.5.1.79 - Spermine synthase / Spermidine aminopropyltransferase Genomic Order:  247
Name:  ? Bostr.26527s0247 Secondary Identifier:  ? PAC:30654535
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta ARGSPECAT-PWY Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.26527s0247 0.5kb upstream 0.5kb upstream 3466 true Scaffold26527: 1491675-1495140 Boechera stricta
Bostr.26527s0247 0.5kb upstream 0.5kb upstream 500 false Scaffold26527: 1491675-1492174 Boechera stricta
Bostr.26527s0247 0.5kb downstream 0.5kb downstream 3466 true Scaffold26527: 1492175-1495640 Boechera stricta
Bostr.26527s0247 0.5kb downstream 0.5kb downstream 500 false Scaffold26527: 1495141-1495640 Boechera stricta
Bostr.26527s0247 1.0kb upstream 1.0kb upstream 3966 true Scaffold26527: 1491175-1495140 Boechera stricta
Bostr.26527s0247 1.0kb upstream 1.0kb upstream 1000 false Scaffold26527: 1491175-1492174 Boechera stricta
Bostr.26527s0247 1.0kb downstream 1.0kb downstream 3966 true Scaffold26527: 1492175-1496140 Boechera stricta
Bostr.26527s0247 1.0kb downstream 1.0kb downstream 1000 false Scaffold26527: 1495141-1496140 Boechera stricta
Bostr.26527s0247 2.0kb upstream 2.0kb upstream 4966 true Scaffold26527: 1490175-1495140 Boechera stricta
Bostr.26527s0247 2.0kb upstream 2.0kb upstream 2000 false Scaffold26527: 1490175-1492174 Boechera stricta
Bostr.26527s0247 2.0kb downstream 2.0kb downstream 4966 true Scaffold26527: 1492175-1497140 Boechera stricta
Bostr.26527s0247 2.0kb downstream 2.0kb downstream 2000 false Scaffold26527: 1495141-1497140 Boechera stricta
Bostr.26527s0247 5.0kb upstream 5.0kb upstream 7966 true Scaffold26527: 1487175-1495140 Boechera stricta
Bostr.26527s0247 5.0kb upstream 5.0kb upstream 5000 false Scaffold26527: 1487175-1492174 Boechera stricta
Bostr.26527s0247 5.0kb downstream 5.0kb downstream 7966 true Scaffold26527: 1492175-1500140 Boechera stricta
Bostr.26527s0247 5.0kb downstream 5.0kb downstream 5000 false Scaffold26527: 1495141-1500140 Boechera stricta
Bostr.26527s0247 10.0kb upstream 10.0kb upstream 12966 true Scaffold26527: 1482175-1495140 Boechera stricta
Bostr.26527s0247 10.0kb upstream 10.0kb upstream 10000 false Scaffold26527: 1482175-1492174 Boechera stricta
Bostr.26527s0247 10.0kb downstream 10.0kb downstream 12966 true Scaffold26527: 1492175-1505140 Boechera stricta
Bostr.26527s0247 10.0kb downstream 10.0kb downstream 10000 false Scaffold26527: 1495141-1505140 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367295 5261 Brassicaceae View MSA
123830996 5264 Brassicales-Malvales View MSA
124336686 5266 SBM View MSA
124242056 5268 Malvidae View MSA
124068940 5270 Rosid View MSA
123748388 5271 Pentapetalae View MSA
122794179 5272 Eudicot View MSA
122050339 5273 Angiosperm View MSA
121346949 5274 Embryophyte View MSA
123426712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain