Gene : Bostr.25993s0556 B. stricta v1.2

Defline:  (1 of 2) PTHR16052:SF0 - TBCC DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  556
Name:  ? Bostr.25993s0556 Secondary Identifier:  ? PAC:30667806

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25993s0556 0.5kb upstream 0.5kb upstream 4331 true Scaffold25993: 2724656-2728986 Boechera stricta
Bostr.25993s0556 0.5kb upstream 0.5kb upstream 500 false Scaffold25993: 2724656-2725155 Boechera stricta
Bostr.25993s0556 0.5kb downstream 0.5kb downstream 4331 true Scaffold25993: 2725156-2729486 Boechera stricta
Bostr.25993s0556 0.5kb downstream 0.5kb downstream 500 false Scaffold25993: 2728987-2729486 Boechera stricta
Bostr.25993s0556 1.0kb upstream 1.0kb upstream 4831 true Scaffold25993: 2724156-2728986 Boechera stricta
Bostr.25993s0556 1.0kb upstream 1.0kb upstream 1000 false Scaffold25993: 2724156-2725155 Boechera stricta
Bostr.25993s0556 1.0kb downstream 1.0kb downstream 4831 true Scaffold25993: 2725156-2729986 Boechera stricta
Bostr.25993s0556 1.0kb downstream 1.0kb downstream 1000 false Scaffold25993: 2728987-2729986 Boechera stricta
Bostr.25993s0556 2.0kb upstream 2.0kb upstream 5831 true Scaffold25993: 2723156-2728986 Boechera stricta
Bostr.25993s0556 2.0kb upstream 2.0kb upstream 2000 false Scaffold25993: 2723156-2725155 Boechera stricta
Bostr.25993s0556 2.0kb downstream 2.0kb downstream 5831 true Scaffold25993: 2725156-2730986 Boechera stricta
Bostr.25993s0556 2.0kb downstream 2.0kb downstream 2000 false Scaffold25993: 2728987-2730986 Boechera stricta
Bostr.25993s0556 5.0kb upstream 5.0kb upstream 8831 true Scaffold25993: 2720156-2728986 Boechera stricta
Bostr.25993s0556 5.0kb upstream 5.0kb upstream 5000 false Scaffold25993: 2720156-2725155 Boechera stricta
Bostr.25993s0556 5.0kb downstream 5.0kb downstream 8831 true Scaffold25993: 2725156-2733986 Boechera stricta
Bostr.25993s0556 5.0kb downstream 5.0kb downstream 5000 false Scaffold25993: 2728987-2733986 Boechera stricta
Bostr.25993s0556 10.0kb upstream 10.0kb upstream 13831 true Scaffold25993: 2715156-2728986 Boechera stricta
Bostr.25993s0556 10.0kb upstream 10.0kb upstream 10000 false Scaffold25993: 2715156-2725155 Boechera stricta
Bostr.25993s0556 10.0kb downstream 10.0kb downstream 13831 true Scaffold25993: 2725156-2738986 Boechera stricta
Bostr.25993s0556 10.0kb downstream 10.0kb downstream 10000 false Scaffold25993: 2728987-2738986 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362348 5261 Brassicaceae View MSA
123798352 5264 Brassicales-Malvales View MSA
124296002 5266 SBM View MSA
124247870 5268 Malvidae View MSA
124060607 5270 Rosid View MSA
123737607 5271 Pentapetalae View MSA
122797393 5272 Eudicot View MSA
122043018 5273 Angiosperm View MSA
121349470 5274 Embryophyte View MSA
123427558 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain