Gene : Bostr.25993s0460 B. stricta v1.2
Defline:  (1 of 2) PF01190//PF04554 - Pollen proteins Ole e I like (Pollen_Ole_e_I) // Extensin-like region (Extensin_2) Genomic Order:  460
Name:  ? Bostr.25993s0460 Secondary Identifier:  ? PAC:30667412
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25993s0460 0.5kb upstream 0.5kb upstream 3903 true Scaffold25993: 2183873-2187775 Boechera stricta
Bostr.25993s0460 0.5kb upstream 0.5kb upstream 500 false Scaffold25993: 2187276-2187775 Boechera stricta
Bostr.25993s0460 0.5kb downstream 0.5kb downstream 3903 true Scaffold25993: 2183373-2187275 Boechera stricta
Bostr.25993s0460 0.5kb downstream 0.5kb downstream 500 false Scaffold25993: 2183373-2183872 Boechera stricta
Bostr.25993s0460 1.0kb upstream 1.0kb upstream 4403 true Scaffold25993: 2183873-2188275 Boechera stricta
Bostr.25993s0460 1.0kb upstream 1.0kb upstream 1000 false Scaffold25993: 2187276-2188275 Boechera stricta
Bostr.25993s0460 1.0kb downstream 1.0kb downstream 4403 true Scaffold25993: 2182873-2187275 Boechera stricta
Bostr.25993s0460 1.0kb downstream 1.0kb downstream 1000 false Scaffold25993: 2182873-2183872 Boechera stricta
Bostr.25993s0460 2.0kb upstream 2.0kb upstream 5403 true Scaffold25993: 2183873-2189275 Boechera stricta
Bostr.25993s0460 2.0kb upstream 2.0kb upstream 2000 false Scaffold25993: 2187276-2189275 Boechera stricta
Bostr.25993s0460 2.0kb downstream 2.0kb downstream 5403 true Scaffold25993: 2181873-2187275 Boechera stricta
Bostr.25993s0460 2.0kb downstream 2.0kb downstream 2000 false Scaffold25993: 2181873-2183872 Boechera stricta
Bostr.25993s0460 5.0kb upstream 5.0kb upstream 8403 true Scaffold25993: 2183873-2192275 Boechera stricta
Bostr.25993s0460 5.0kb upstream 5.0kb upstream 5000 false Scaffold25993: 2187276-2192275 Boechera stricta
Bostr.25993s0460 5.0kb downstream 5.0kb downstream 8403 true Scaffold25993: 2178873-2187275 Boechera stricta
Bostr.25993s0460 5.0kb downstream 5.0kb downstream 5000 false Scaffold25993: 2178873-2183872 Boechera stricta
Bostr.25993s0460 10.0kb upstream 10.0kb upstream 13403 true Scaffold25993: 2183873-2197275 Boechera stricta
Bostr.25993s0460 10.0kb upstream 10.0kb upstream 10000 false Scaffold25993: 2187276-2197275 Boechera stricta
Bostr.25993s0460 10.0kb downstream 10.0kb downstream 13403 true Scaffold25993: 2173873-2187275 Boechera stricta
Bostr.25993s0460 10.0kb downstream 10.0kb downstream 10000 false Scaffold25993: 2173873-2183872 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122341135 5261 Brassicaceae Singleton cluster - no MSA
123841391 5264 Brassicales-Malvales View MSA
124322916 5266 SBM View MSA
124252232 5268 Malvidae View MSA
124072659 5270 Rosid View MSA
123753028 5271 Pentapetalae View MSA
122796591 5272 Eudicot View MSA
122051631 5273 Angiosperm View MSA
121349317 5274 Embryophyte View MSA
123381274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain