Gene : Bostr.25993s0476 B. stricta v1.2
Defline:  (1 of 4) 1.5.3.16//1.5.3.17 - Spermine oxidase / SMO // Non-specific polyamine oxidase / Polyamine oxidase Genomic Order:  476
Name:  ? Bostr.25993s0476 Secondary Identifier:  ? PAC:30667666
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-6441 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25993s0476 0.5kb upstream 0.5kb upstream 3534 true Scaffold25993: 2289960-2293493 Boechera stricta
Bostr.25993s0476 0.5kb upstream 0.5kb upstream 500 false Scaffold25993: 2292994-2293493 Boechera stricta
Bostr.25993s0476 0.5kb downstream 0.5kb downstream 3534 true Scaffold25993: 2289460-2292993 Boechera stricta
Bostr.25993s0476 0.5kb downstream 0.5kb downstream 500 false Scaffold25993: 2289460-2289959 Boechera stricta
Bostr.25993s0476 1.0kb upstream 1.0kb upstream 4034 true Scaffold25993: 2289960-2293993 Boechera stricta
Bostr.25993s0476 1.0kb upstream 1.0kb upstream 1000 false Scaffold25993: 2292994-2293993 Boechera stricta
Bostr.25993s0476 1.0kb downstream 1.0kb downstream 4034 true Scaffold25993: 2288960-2292993 Boechera stricta
Bostr.25993s0476 1.0kb downstream 1.0kb downstream 1000 false Scaffold25993: 2288960-2289959 Boechera stricta
Bostr.25993s0476 2.0kb upstream 2.0kb upstream 5034 true Scaffold25993: 2289960-2294993 Boechera stricta
Bostr.25993s0476 2.0kb upstream 2.0kb upstream 2000 false Scaffold25993: 2292994-2294993 Boechera stricta
Bostr.25993s0476 2.0kb downstream 2.0kb downstream 5034 true Scaffold25993: 2287960-2292993 Boechera stricta
Bostr.25993s0476 2.0kb downstream 2.0kb downstream 2000 false Scaffold25993: 2287960-2289959 Boechera stricta
Bostr.25993s0476 5.0kb upstream 5.0kb upstream 8034 true Scaffold25993: 2289960-2297993 Boechera stricta
Bostr.25993s0476 5.0kb upstream 5.0kb upstream 5000 false Scaffold25993: 2292994-2297993 Boechera stricta
Bostr.25993s0476 5.0kb downstream 5.0kb downstream 8034 true Scaffold25993: 2284960-2292993 Boechera stricta
Bostr.25993s0476 5.0kb downstream 5.0kb downstream 5000 false Scaffold25993: 2284960-2289959 Boechera stricta
Bostr.25993s0476 10.0kb upstream 10.0kb upstream 13034 true Scaffold25993: 2289960-2302993 Boechera stricta
Bostr.25993s0476 10.0kb upstream 10.0kb upstream 10000 false Scaffold25993: 2292994-2302993 Boechera stricta
Bostr.25993s0476 10.0kb downstream 10.0kb downstream 13034 true Scaffold25993: 2279960-2292993 Boechera stricta
Bostr.25993s0476 10.0kb downstream 10.0kb downstream 10000 false Scaffold25993: 2279960-2289959 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373356 5261 Brassicaceae View MSA
123831271 5264 Brassicales-Malvales View MSA
124342575 5266 SBM View MSA
124244923 5268 Malvidae View MSA
124065173 5270 Rosid View MSA
123745734 5271 Pentapetalae View MSA
122788869 5272 Eudicot View MSA
122044597 5273 Angiosperm View MSA
121345919 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain