Gene : Bostr.25993s0490 B. stricta v1.2
Defline:  (1 of 1) PTHR10210:SF34 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 4 Genomic Order:  490
Name:  ? Bostr.25993s0490 Secondary Identifier:  ? PAC:30667956
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY0-662 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25993s0490 0.5kb upstream 0.5kb upstream 2842 true Scaffold25993: 2373842-2376683 Boechera stricta
Bostr.25993s0490 0.5kb upstream 0.5kb upstream 500 false Scaffold25993: 2376184-2376683 Boechera stricta
Bostr.25993s0490 0.5kb downstream 0.5kb downstream 2842 true Scaffold25993: 2373342-2376183 Boechera stricta
Bostr.25993s0490 0.5kb downstream 0.5kb downstream 500 false Scaffold25993: 2373342-2373841 Boechera stricta
Bostr.25993s0490 1.0kb upstream 1.0kb upstream 3342 true Scaffold25993: 2373842-2377183 Boechera stricta
Bostr.25993s0490 1.0kb upstream 1.0kb upstream 1000 false Scaffold25993: 2376184-2377183 Boechera stricta
Bostr.25993s0490 1.0kb downstream 1.0kb downstream 3342 true Scaffold25993: 2372842-2376183 Boechera stricta
Bostr.25993s0490 1.0kb downstream 1.0kb downstream 1000 false Scaffold25993: 2372842-2373841 Boechera stricta
Bostr.25993s0490 2.0kb upstream 2.0kb upstream 4342 true Scaffold25993: 2373842-2378183 Boechera stricta
Bostr.25993s0490 2.0kb upstream 2.0kb upstream 2000 false Scaffold25993: 2376184-2378183 Boechera stricta
Bostr.25993s0490 2.0kb downstream 2.0kb downstream 4342 true Scaffold25993: 2371842-2376183 Boechera stricta
Bostr.25993s0490 2.0kb downstream 2.0kb downstream 2000 false Scaffold25993: 2371842-2373841 Boechera stricta
Bostr.25993s0490 5.0kb upstream 5.0kb upstream 7342 true Scaffold25993: 2373842-2381183 Boechera stricta
Bostr.25993s0490 5.0kb upstream 5.0kb upstream 5000 false Scaffold25993: 2376184-2381183 Boechera stricta
Bostr.25993s0490 5.0kb downstream 5.0kb downstream 7342 true Scaffold25993: 2368842-2376183 Boechera stricta
Bostr.25993s0490 5.0kb downstream 5.0kb downstream 5000 false Scaffold25993: 2368842-2373841 Boechera stricta
Bostr.25993s0490 10.0kb upstream 10.0kb upstream 12342 true Scaffold25993: 2373842-2386183 Boechera stricta
Bostr.25993s0490 10.0kb upstream 10.0kb upstream 10000 false Scaffold25993: 2376184-2386183 Boechera stricta
Bostr.25993s0490 10.0kb downstream 10.0kb downstream 12342 true Scaffold25993: 2363842-2376183 Boechera stricta
Bostr.25993s0490 10.0kb downstream 10.0kb downstream 10000 false Scaffold25993: 2363842-2373841 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372606 5261 Brassicaceae View MSA
123829619 5264 Brassicales-Malvales View MSA
124337787 5266 SBM View MSA
124247414 5268 Malvidae View MSA
124063296 5270 Rosid View MSA
123738822 5271 Pentapetalae View MSA
122786228 5272 Eudicot View MSA
122048410 5273 Angiosperm View MSA
121347977 5274 Embryophyte View MSA
123424356 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain