Gene : Bostr.25993s0504 B. stricta v1.2
Defline:  (1 of 5) 2.3.3.1 - Citrate (Si)-synthase / Citrate oxaloacetate-lyase ((pro-3S)-CH(2)COO->acetyl-CoA) Genomic Order:  504
Name:  ? Bostr.25993s0504 Secondary Identifier:  ? PAC:30667936
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta GLYOXYLATE-BYPASS Boechera stricta pathologic  
Bstricta PWY-5464 Boechera stricta pathologic  
Bstricta PWY-561 Boechera stricta pathologic  
Bstricta PWY-5690 Boechera stricta pathologic  
Bstricta PWY-6549 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25993s0504 0.5kb upstream 0.5kb upstream 3865 true Scaffold25993: 2447733-2451597 Boechera stricta
Bostr.25993s0504 0.5kb upstream 0.5kb upstream 500 false Scaffold25993: 2447733-2448232 Boechera stricta
Bostr.25993s0504 0.5kb downstream 0.5kb downstream 3865 true Scaffold25993: 2448233-2452097 Boechera stricta
Bostr.25993s0504 0.5kb downstream 0.5kb downstream 500 false Scaffold25993: 2451598-2452097 Boechera stricta
Bostr.25993s0504 1.0kb upstream 1.0kb upstream 4365 true Scaffold25993: 2447233-2451597 Boechera stricta
Bostr.25993s0504 1.0kb upstream 1.0kb upstream 1000 false Scaffold25993: 2447233-2448232 Boechera stricta
Bostr.25993s0504 1.0kb downstream 1.0kb downstream 4365 true Scaffold25993: 2448233-2452597 Boechera stricta
Bostr.25993s0504 1.0kb downstream 1.0kb downstream 1000 false Scaffold25993: 2451598-2452597 Boechera stricta
Bostr.25993s0504 2.0kb upstream 2.0kb upstream 5365 true Scaffold25993: 2446233-2451597 Boechera stricta
Bostr.25993s0504 2.0kb upstream 2.0kb upstream 2000 false Scaffold25993: 2446233-2448232 Boechera stricta
Bostr.25993s0504 2.0kb downstream 2.0kb downstream 5365 true Scaffold25993: 2448233-2453597 Boechera stricta
Bostr.25993s0504 2.0kb downstream 2.0kb downstream 2000 false Scaffold25993: 2451598-2453597 Boechera stricta
Bostr.25993s0504 5.0kb upstream 5.0kb upstream 8365 true Scaffold25993: 2443233-2451597 Boechera stricta
Bostr.25993s0504 5.0kb upstream 5.0kb upstream 5000 false Scaffold25993: 2443233-2448232 Boechera stricta
Bostr.25993s0504 5.0kb downstream 5.0kb downstream 8365 true Scaffold25993: 2448233-2456597 Boechera stricta
Bostr.25993s0504 5.0kb downstream 5.0kb downstream 5000 false Scaffold25993: 2451598-2456597 Boechera stricta
Bostr.25993s0504 10.0kb upstream 10.0kb upstream 13365 true Scaffold25993: 2438233-2451597 Boechera stricta
Bostr.25993s0504 10.0kb upstream 10.0kb upstream 10000 false Scaffold25993: 2438233-2448232 Boechera stricta
Bostr.25993s0504 10.0kb downstream 10.0kb downstream 13365 true Scaffold25993: 2448233-2461597 Boechera stricta
Bostr.25993s0504 10.0kb downstream 10.0kb downstream 10000 false Scaffold25993: 2451598-2461597 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379222 5261 Brassicaceae View MSA
123836656 5264 Brassicales-Malvales View MSA
124345629 5266 SBM View MSA
124251480 5268 Malvidae View MSA
124065792 5270 Rosid View MSA
123748183 5271 Pentapetalae View MSA
122794190 5272 Eudicot View MSA
122044026 5273 Angiosperm View MSA
121344650 5274 Embryophyte View MSA
123424100 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain