Gene : Bostr.25993s0381 B. stricta v1.2
Defline:  (1 of 1) 2.1.1.165//2.1.1.9 - Methyl halide transferase / Methyl chloride transferase Genomic Order:  381
Name:  ? Bostr.25993s0381 Secondary Identifier:  ? PAC:30667823
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-6730 Boechera stricta pathologic  
Bstricta PWY-6736 Boechera stricta pathologic  
Bstricta PWY-6842 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25993s0381 0.5kb upstream 0.5kb upstream 3010 true Scaffold25993: 1793086-1796095 Boechera stricta
Bostr.25993s0381 0.5kb upstream 0.5kb upstream 500 false Scaffold25993: 1793086-1793585 Boechera stricta
Bostr.25993s0381 0.5kb downstream 0.5kb downstream 3010 true Scaffold25993: 1793586-1796595 Boechera stricta
Bostr.25993s0381 0.5kb downstream 0.5kb downstream 500 false Scaffold25993: 1796096-1796595 Boechera stricta
Bostr.25993s0381 1.0kb upstream 1.0kb upstream 3510 true Scaffold25993: 1792586-1796095 Boechera stricta
Bostr.25993s0381 1.0kb upstream 1.0kb upstream 1000 false Scaffold25993: 1792586-1793585 Boechera stricta
Bostr.25993s0381 1.0kb downstream 1.0kb downstream 3510 true Scaffold25993: 1793586-1797095 Boechera stricta
Bostr.25993s0381 1.0kb downstream 1.0kb downstream 1000 false Scaffold25993: 1796096-1797095 Boechera stricta
Bostr.25993s0381 2.0kb upstream 2.0kb upstream 4510 true Scaffold25993: 1791586-1796095 Boechera stricta
Bostr.25993s0381 2.0kb upstream 2.0kb upstream 2000 false Scaffold25993: 1791586-1793585 Boechera stricta
Bostr.25993s0381 2.0kb downstream 2.0kb downstream 4510 true Scaffold25993: 1793586-1798095 Boechera stricta
Bostr.25993s0381 2.0kb downstream 2.0kb downstream 2000 false Scaffold25993: 1796096-1798095 Boechera stricta
Bostr.25993s0381 5.0kb upstream 5.0kb upstream 7510 true Scaffold25993: 1788586-1796095 Boechera stricta
Bostr.25993s0381 5.0kb upstream 5.0kb upstream 5000 false Scaffold25993: 1788586-1793585 Boechera stricta
Bostr.25993s0381 5.0kb downstream 5.0kb downstream 7510 true Scaffold25993: 1793586-1801095 Boechera stricta
Bostr.25993s0381 5.0kb downstream 5.0kb downstream 5000 false Scaffold25993: 1796096-1801095 Boechera stricta
Bostr.25993s0381 10.0kb upstream 10.0kb upstream 12510 true Scaffold25993: 1783586-1796095 Boechera stricta
Bostr.25993s0381 10.0kb upstream 10.0kb upstream 10000 false Scaffold25993: 1783586-1793585 Boechera stricta
Bostr.25993s0381 10.0kb downstream 10.0kb downstream 12510 true Scaffold25993: 1793586-1806095 Boechera stricta
Bostr.25993s0381 10.0kb downstream 10.0kb downstream 10000 false Scaffold25993: 1796096-1806095 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040998 5273 Angiosperm View MSA
122379294 5261 Brassicaceae View MSA
123802194 5264 Brassicales-Malvales View MSA
124299408 5266 SBM View MSA
124249928 5268 Malvidae View MSA
124062480 5270 Rosid View MSA
123741516 5271 Pentapetalae View MSA
122787358 5272 Eudicot View MSA
121346954 5274 Embryophyte View MSA
123424412 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain