Gene : Bostr.25993s0385 B. stricta v1.2
Defline:  (1 of 3) PTHR31375:SF31 - F3F20.10 PROTEIN-RELATED Genomic Order:  385
Name:  ? Bostr.25993s0385 Secondary Identifier:  ? PAC:30667605
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-1081 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25993s0385 0.5kb upstream 0.5kb upstream 2278 true Scaffold25993: 1812374-1814651 Boechera stricta
Bostr.25993s0385 0.5kb upstream 0.5kb upstream 500 false Scaffold25993: 1814152-1814651 Boechera stricta
Bostr.25993s0385 0.5kb downstream 0.5kb downstream 2278 true Scaffold25993: 1811874-1814151 Boechera stricta
Bostr.25993s0385 0.5kb downstream 0.5kb downstream 500 false Scaffold25993: 1811874-1812373 Boechera stricta
Bostr.25993s0385 1.0kb upstream 1.0kb upstream 2778 true Scaffold25993: 1812374-1815151 Boechera stricta
Bostr.25993s0385 1.0kb upstream 1.0kb upstream 1000 false Scaffold25993: 1814152-1815151 Boechera stricta
Bostr.25993s0385 1.0kb downstream 1.0kb downstream 2778 true Scaffold25993: 1811374-1814151 Boechera stricta
Bostr.25993s0385 1.0kb downstream 1.0kb downstream 1000 false Scaffold25993: 1811374-1812373 Boechera stricta
Bostr.25993s0385 2.0kb upstream 2.0kb upstream 3778 true Scaffold25993: 1812374-1816151 Boechera stricta
Bostr.25993s0385 2.0kb upstream 2.0kb upstream 2000 false Scaffold25993: 1814152-1816151 Boechera stricta
Bostr.25993s0385 2.0kb downstream 2.0kb downstream 3778 true Scaffold25993: 1810374-1814151 Boechera stricta
Bostr.25993s0385 2.0kb downstream 2.0kb downstream 2000 false Scaffold25993: 1810374-1812373 Boechera stricta
Bostr.25993s0385 5.0kb upstream 5.0kb upstream 6778 true Scaffold25993: 1812374-1819151 Boechera stricta
Bostr.25993s0385 5.0kb upstream 5.0kb upstream 5000 false Scaffold25993: 1814152-1819151 Boechera stricta
Bostr.25993s0385 5.0kb downstream 5.0kb downstream 6778 true Scaffold25993: 1807374-1814151 Boechera stricta
Bostr.25993s0385 5.0kb downstream 5.0kb downstream 5000 false Scaffold25993: 1807374-1812373 Boechera stricta
Bostr.25993s0385 10.0kb upstream 10.0kb upstream 11778 true Scaffold25993: 1812374-1824151 Boechera stricta
Bostr.25993s0385 10.0kb upstream 10.0kb upstream 10000 false Scaffold25993: 1814152-1824151 Boechera stricta
Bostr.25993s0385 10.0kb downstream 10.0kb downstream 11778 true Scaffold25993: 1802374-1814151 Boechera stricta
Bostr.25993s0385 10.0kb downstream 10.0kb downstream 10000 false Scaffold25993: 1802374-1812373 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363034 5261 Brassicaceae View MSA
123839902 5264 Brassicales-Malvales View MSA
124322664 5266 SBM View MSA
124241850 5268 Malvidae View MSA
124074410 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain