Gene : Bostr.26833s0051 B. stricta v1.2
Defline:  (1 of 1) PTHR11062:SF81 - BETA-1,4-XYLOSYLTRANSFERASE IRX10L-RELATED Genomic Order:  51
Name:  ? Bostr.26833s0051 Secondary Identifier:  ? PAC:30653622
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5980 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.26833s0051 0.5kb upstream 0.5kb upstream 3254 true Scaffold26833: 314713-317966 Boechera stricta
Bostr.26833s0051 0.5kb upstream 0.5kb upstream 500 false Scaffold26833: 314713-315212 Boechera stricta
Bostr.26833s0051 0.5kb downstream 0.5kb downstream 3254 true Scaffold26833: 315213-318466 Boechera stricta
Bostr.26833s0051 0.5kb downstream 0.5kb downstream 500 false Scaffold26833: 317967-318466 Boechera stricta
Bostr.26833s0051 1.0kb upstream 1.0kb upstream 3754 true Scaffold26833: 314213-317966 Boechera stricta
Bostr.26833s0051 1.0kb upstream 1.0kb upstream 1000 false Scaffold26833: 314213-315212 Boechera stricta
Bostr.26833s0051 1.0kb downstream 1.0kb downstream 3754 true Scaffold26833: 315213-318966 Boechera stricta
Bostr.26833s0051 1.0kb downstream 1.0kb downstream 1000 false Scaffold26833: 317967-318966 Boechera stricta
Bostr.26833s0051 2.0kb upstream 2.0kb upstream 4754 true Scaffold26833: 313213-317966 Boechera stricta
Bostr.26833s0051 2.0kb upstream 2.0kb upstream 2000 false Scaffold26833: 313213-315212 Boechera stricta
Bostr.26833s0051 2.0kb downstream 2.0kb downstream 4754 true Scaffold26833: 315213-319966 Boechera stricta
Bostr.26833s0051 2.0kb downstream 2.0kb downstream 2000 false Scaffold26833: 317967-319966 Boechera stricta
Bostr.26833s0051 5.0kb upstream 5.0kb upstream 7754 true Scaffold26833: 310213-317966 Boechera stricta
Bostr.26833s0051 5.0kb upstream 5.0kb upstream 5000 false Scaffold26833: 310213-315212 Boechera stricta
Bostr.26833s0051 5.0kb downstream 5.0kb downstream 7754 true Scaffold26833: 315213-322966 Boechera stricta
Bostr.26833s0051 5.0kb downstream 5.0kb downstream 5000 false Scaffold26833: 317967-322966 Boechera stricta
Bostr.26833s0051 10.0kb upstream 10.0kb upstream 12754 true Scaffold26833: 305213-317966 Boechera stricta
Bostr.26833s0051 10.0kb upstream 10.0kb upstream 10000 false Scaffold26833: 305213-315212 Boechera stricta
Bostr.26833s0051 10.0kb downstream 10.0kb downstream 12754 true Scaffold26833: 315213-327966 Boechera stricta
Bostr.26833s0051 10.0kb downstream 10.0kb downstream 10000 false Scaffold26833: 317967-327966 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361554 5261 Brassicaceae View MSA
123831717 5264 Brassicales-Malvales View MSA
124343729 5266 SBM View MSA
124242312 5268 Malvidae View MSA
124072304 5270 Rosid View MSA
123741163 5271 Pentapetalae View MSA
122792713 5272 Eudicot View MSA
122045479 5273 Angiosperm View MSA
121345748 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain