Gene : Bostr.26675s0397 B. stricta v1.2

Defline:  (1 of 4) PTHR31189:SF1 - 12S SEED STORAGE PROTEIN CRA1-RELATED Genomic Order:  397
Name:  ? Bostr.26675s0397 Secondary Identifier:  ? PAC:30668451

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.26675s0397 0.5kb upstream 0.5kb upstream 2931 true Scaffold26675: 2368712-2371642 Boechera stricta
Bostr.26675s0397 0.5kb upstream 0.5kb upstream 500 false Scaffold26675: 2368712-2369211 Boechera stricta
Bostr.26675s0397 0.5kb downstream 0.5kb downstream 2931 true Scaffold26675: 2369212-2372142 Boechera stricta
Bostr.26675s0397 0.5kb downstream 0.5kb downstream 500 false Scaffold26675: 2371643-2372142 Boechera stricta
Bostr.26675s0397 1.0kb upstream 1.0kb upstream 3431 true Scaffold26675: 2368212-2371642 Boechera stricta
Bostr.26675s0397 1.0kb upstream 1.0kb upstream 1000 false Scaffold26675: 2368212-2369211 Boechera stricta
Bostr.26675s0397 1.0kb downstream 1.0kb downstream 3431 true Scaffold26675: 2369212-2372642 Boechera stricta
Bostr.26675s0397 1.0kb downstream 1.0kb downstream 1000 false Scaffold26675: 2371643-2372642 Boechera stricta
Bostr.26675s0397 2.0kb upstream 2.0kb upstream 4431 true Scaffold26675: 2367212-2371642 Boechera stricta
Bostr.26675s0397 2.0kb upstream 2.0kb upstream 2000 false Scaffold26675: 2367212-2369211 Boechera stricta
Bostr.26675s0397 2.0kb downstream 2.0kb downstream 4431 true Scaffold26675: 2369212-2373642 Boechera stricta
Bostr.26675s0397 2.0kb downstream 2.0kb downstream 2000 false Scaffold26675: 2371643-2373642 Boechera stricta
Bostr.26675s0397 5.0kb upstream 5.0kb upstream 7431 true Scaffold26675: 2364212-2371642 Boechera stricta
Bostr.26675s0397 5.0kb upstream 5.0kb upstream 5000 false Scaffold26675: 2364212-2369211 Boechera stricta
Bostr.26675s0397 5.0kb downstream 5.0kb downstream 7431 true Scaffold26675: 2369212-2376642 Boechera stricta
Bostr.26675s0397 5.0kb downstream 5.0kb downstream 5000 false Scaffold26675: 2371643-2376642 Boechera stricta
Bostr.26675s0397 10.0kb upstream 10.0kb upstream 12431 true Scaffold26675: 2359212-2371642 Boechera stricta
Bostr.26675s0397 10.0kb upstream 10.0kb upstream 10000 false Scaffold26675: 2359212-2369211 Boechera stricta
Bostr.26675s0397 10.0kb downstream 10.0kb downstream 12431 true Scaffold26675: 2369212-2381642 Boechera stricta
Bostr.26675s0397 10.0kb downstream 10.0kb downstream 10000 false Scaffold26675: 2371643-2381642 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368261 5261 Brassicaceae View MSA
123839943 5264 Brassicales-Malvales View MSA
124350011 5266 SBM View MSA
124254285 5268 Malvidae View MSA
124062039 5270 Rosid View MSA
123752500 5271 Pentapetalae View MSA
122788518 5272 Eudicot View MSA
122051681 5273 Angiosperm View MSA
121312610 5274 Embryophyte View MSA
123349767 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain