Gene : Bostr.26675s0280 B. stricta v1.2
Defline:  (1 of 1) PTHR23023:SF135 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA10-RELATED Genomic Order:  280
Name:  ? Bostr.26675s0280 Secondary Identifier:  ? PAC:30668534
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWYDQC-4 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.26675s0280 0.5kb upstream 0.5kb upstream 2692 true Scaffold26675: 1774570-1777261 Boechera stricta
Bostr.26675s0280 0.5kb upstream 0.5kb upstream 500 false Scaffold26675: 1776762-1777261 Boechera stricta
Bostr.26675s0280 0.5kb downstream 0.5kb downstream 2692 true Scaffold26675: 1774070-1776761 Boechera stricta
Bostr.26675s0280 0.5kb downstream 0.5kb downstream 500 false Scaffold26675: 1774070-1774569 Boechera stricta
Bostr.26675s0280 1.0kb upstream 1.0kb upstream 3192 true Scaffold26675: 1774570-1777761 Boechera stricta
Bostr.26675s0280 1.0kb upstream 1.0kb upstream 1000 false Scaffold26675: 1776762-1777761 Boechera stricta
Bostr.26675s0280 1.0kb downstream 1.0kb downstream 3192 true Scaffold26675: 1773570-1776761 Boechera stricta
Bostr.26675s0280 1.0kb downstream 1.0kb downstream 1000 false Scaffold26675: 1773570-1774569 Boechera stricta
Bostr.26675s0280 2.0kb upstream 2.0kb upstream 4192 true Scaffold26675: 1774570-1778761 Boechera stricta
Bostr.26675s0280 2.0kb upstream 2.0kb upstream 2000 false Scaffold26675: 1776762-1778761 Boechera stricta
Bostr.26675s0280 2.0kb downstream 2.0kb downstream 4192 true Scaffold26675: 1772570-1776761 Boechera stricta
Bostr.26675s0280 2.0kb downstream 2.0kb downstream 2000 false Scaffold26675: 1772570-1774569 Boechera stricta
Bostr.26675s0280 5.0kb upstream 5.0kb upstream 7192 true Scaffold26675: 1774570-1781761 Boechera stricta
Bostr.26675s0280 5.0kb upstream 5.0kb upstream 5000 false Scaffold26675: 1776762-1781761 Boechera stricta
Bostr.26675s0280 5.0kb downstream 5.0kb downstream 7192 true Scaffold26675: 1769570-1776761 Boechera stricta
Bostr.26675s0280 5.0kb downstream 5.0kb downstream 5000 false Scaffold26675: 1769570-1774569 Boechera stricta
Bostr.26675s0280 10.0kb upstream 10.0kb upstream 12192 true Scaffold26675: 1774570-1786761 Boechera stricta
Bostr.26675s0280 10.0kb upstream 10.0kb upstream 10000 false Scaffold26675: 1776762-1786761 Boechera stricta
Bostr.26675s0280 10.0kb downstream 10.0kb downstream 12192 true Scaffold26675: 1764570-1776761 Boechera stricta
Bostr.26675s0280 10.0kb downstream 10.0kb downstream 10000 false Scaffold26675: 1764570-1774569 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364658 5261 Brassicaceae View MSA
123829988 5264 Brassicales-Malvales View MSA
124349496 5266 SBM View MSA
124250017 5268 Malvidae View MSA
124069751 5270 Rosid View MSA
123749752 5271 Pentapetalae View MSA
122794899 5272 Eudicot View MSA
122047342 5273 Angiosperm View MSA
121310731 5274 Embryophyte View MSA
123348144 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain